Gene : Medtr1g021825 M. truncatula Mt4.0v1
Defline:  (1 of 13) PF00646//PF07723 - F-box domain (F-box) // Leucine Rich Repeat (LRR_2) Description:  ubiquitin-protein ligase, putative
Genomic Order:  866 Name:  ? Medtr1g021825
Secondary Identifier:  ? PAC:31092999
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g021825 0.5kb upstream 0.5kb upstream 5109 true chr1: 6598972-6604080 Medicago truncatula
Medtr1g021825 0.5kb upstream 0.5kb upstream 500 false chr1: 6603581-6604080 Medicago truncatula
Medtr1g021825 0.5kb downstream 0.5kb downstream 5109 true chr1: 6598472-6603580 Medicago truncatula
Medtr1g021825 0.5kb downstream 0.5kb downstream 500 false chr1: 6598472-6598971 Medicago truncatula
Medtr1g021825 1.0kb upstream 1.0kb upstream 5609 true chr1: 6598972-6604580 Medicago truncatula
Medtr1g021825 1.0kb upstream 1.0kb upstream 1000 false chr1: 6603581-6604580 Medicago truncatula
Medtr1g021825 1.0kb downstream 1.0kb downstream 5609 true chr1: 6597972-6603580 Medicago truncatula
Medtr1g021825 1.0kb downstream 1.0kb downstream 1000 false chr1: 6597972-6598971 Medicago truncatula
Medtr1g021825 2.0kb upstream 2.0kb upstream 6609 true chr1: 6598972-6605580 Medicago truncatula
Medtr1g021825 2.0kb upstream 2.0kb upstream 2000 false chr1: 6603581-6605580 Medicago truncatula
Medtr1g021825 2.0kb downstream 2.0kb downstream 6609 true chr1: 6596972-6603580 Medicago truncatula
Medtr1g021825 2.0kb downstream 2.0kb downstream 2000 false chr1: 6596972-6598971 Medicago truncatula
Medtr1g021825 5.0kb upstream 5.0kb upstream 9609 true chr1: 6598972-6608580 Medicago truncatula
Medtr1g021825 5.0kb upstream 5.0kb upstream 5000 false chr1: 6603581-6608580 Medicago truncatula
Medtr1g021825 5.0kb downstream 5.0kb downstream 9609 true chr1: 6593972-6603580 Medicago truncatula
Medtr1g021825 5.0kb downstream 5.0kb downstream 5000 false chr1: 6593972-6598971 Medicago truncatula
Medtr1g021825 10.0kb upstream 10.0kb upstream 14609 true chr1: 6598972-6613580 Medicago truncatula
Medtr1g021825 10.0kb upstream 10.0kb upstream 10000 false chr1: 6603581-6613580 Medicago truncatula
Medtr1g021825 10.0kb downstream 10.0kb downstream 14609 true chr1: 6588972-6603580 Medicago truncatula
Medtr1g021825 10.0kb downstream 10.0kb downstream 10000 false chr1: 6588972-6598971 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304842 5265 Fabidae View MSA
124071002 5270 Rosid View MSA
123753592 5271 Pentapetalae View MSA
122797964 5272 Eudicot View MSA
122050940 5273 Angiosperm View MSA
121351679 5274 Embryophyte View MSA
123382274 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.112        
cufflinks 0.771        
cufflinks 1.05        
cufflinks 1.199        
cufflinks 0.833        
cufflinks 0.663       Low
cufflinks 1.512       High
cufflinks 0.884        
cufflinks 0.895        

0 Strain