Gene : Medtr1g021760 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR21569:SF2 - 30S RIBOSOMAL PROTEIN S9, CHLOROPLASTIC Description:  30S ribosomal protein S9P
Genomic Order:  862 Name:  ? Medtr1g021760
Secondary Identifier:  ? PAC:31097774
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g021760 0.5kb upstream 0.5kb upstream 2869 true chr1: 6580128-6582996 Medicago truncatula
Medtr1g021760 0.5kb upstream 0.5kb upstream 500 false chr1: 6582497-6582996 Medicago truncatula
Medtr1g021760 0.5kb downstream 0.5kb downstream 2869 true chr1: 6579628-6582496 Medicago truncatula
Medtr1g021760 0.5kb downstream 0.5kb downstream 500 false chr1: 6579628-6580127 Medicago truncatula
Medtr1g021760 1.0kb upstream 1.0kb upstream 3369 true chr1: 6580128-6583496 Medicago truncatula
Medtr1g021760 1.0kb upstream 1.0kb upstream 1000 false chr1: 6582497-6583496 Medicago truncatula
Medtr1g021760 1.0kb downstream 1.0kb downstream 3369 true chr1: 6579128-6582496 Medicago truncatula
Medtr1g021760 1.0kb downstream 1.0kb downstream 1000 false chr1: 6579128-6580127 Medicago truncatula
Medtr1g021760 2.0kb upstream 2.0kb upstream 4369 true chr1: 6580128-6584496 Medicago truncatula
Medtr1g021760 2.0kb upstream 2.0kb upstream 2000 false chr1: 6582497-6584496 Medicago truncatula
Medtr1g021760 2.0kb downstream 2.0kb downstream 4369 true chr1: 6578128-6582496 Medicago truncatula
Medtr1g021760 2.0kb downstream 2.0kb downstream 2000 false chr1: 6578128-6580127 Medicago truncatula
Medtr1g021760 5.0kb upstream 5.0kb upstream 7369 true chr1: 6580128-6587496 Medicago truncatula
Medtr1g021760 5.0kb upstream 5.0kb upstream 5000 false chr1: 6582497-6587496 Medicago truncatula
Medtr1g021760 5.0kb downstream 5.0kb downstream 7369 true chr1: 6575128-6582496 Medicago truncatula
Medtr1g021760 5.0kb downstream 5.0kb downstream 5000 false chr1: 6575128-6580127 Medicago truncatula
Medtr1g021760 10.0kb upstream 10.0kb upstream 12369 true chr1: 6580128-6592496 Medicago truncatula
Medtr1g021760 10.0kb upstream 10.0kb upstream 10000 false chr1: 6582497-6592496 Medicago truncatula
Medtr1g021760 10.0kb downstream 10.0kb downstream 12369 true chr1: 6570128-6582496 Medicago truncatula
Medtr1g021760 10.0kb downstream 10.0kb downstream 10000 false chr1: 6570128-6580127 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304774 5265 Fabidae View MSA
124063747 5270 Rosid View MSA
123737620 5271 Pentapetalae View MSA
122790532 5272 Eudicot View MSA
122043582 5273 Angiosperm View MSA
121345989 5274 Embryophyte View MSA
123426879 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.337       Low
cufflinks 72.71     High High
cufflinks 56.495     High  
cufflinks 4.757        
cufflinks 79.258     High High
cufflinks 4.684        
cufflinks 1.189       Low
cufflinks 83.062     High High
cufflinks 3.003        

0 Strain