Gene : Medtr1g021740 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11206:SF115 - MATE EFFLUX FAMILY PROTEIN Description:  MATE efflux family protein
Genomic Order:  863 Name:  ? Medtr1g021740
Secondary Identifier:  ? PAC:31098628
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g021740 0.5kb upstream 0.5kb upstream 5348 true chr1: 6584225-6589572 Medicago truncatula
Medtr1g021740 0.5kb upstream 0.5kb upstream 500 false chr1: 6589073-6589572 Medicago truncatula
Medtr1g021740 0.5kb downstream 0.5kb downstream 5348 true chr1: 6583725-6589072 Medicago truncatula
Medtr1g021740 0.5kb downstream 0.5kb downstream 500 false chr1: 6583725-6584224 Medicago truncatula
Medtr1g021740 1.0kb upstream 1.0kb upstream 5848 true chr1: 6584225-6590072 Medicago truncatula
Medtr1g021740 1.0kb upstream 1.0kb upstream 1000 false chr1: 6589073-6590072 Medicago truncatula
Medtr1g021740 1.0kb downstream 1.0kb downstream 5848 true chr1: 6583225-6589072 Medicago truncatula
Medtr1g021740 1.0kb downstream 1.0kb downstream 1000 false chr1: 6583225-6584224 Medicago truncatula
Medtr1g021740 2.0kb upstream 2.0kb upstream 6848 true chr1: 6584225-6591072 Medicago truncatula
Medtr1g021740 2.0kb upstream 2.0kb upstream 2000 false chr1: 6589073-6591072 Medicago truncatula
Medtr1g021740 2.0kb downstream 2.0kb downstream 6848 true chr1: 6582225-6589072 Medicago truncatula
Medtr1g021740 2.0kb downstream 2.0kb downstream 2000 false chr1: 6582225-6584224 Medicago truncatula
Medtr1g021740 5.0kb upstream 5.0kb upstream 9848 true chr1: 6584225-6594072 Medicago truncatula
Medtr1g021740 5.0kb upstream 5.0kb upstream 5000 false chr1: 6589073-6594072 Medicago truncatula
Medtr1g021740 5.0kb downstream 5.0kb downstream 9848 true chr1: 6579225-6589072 Medicago truncatula
Medtr1g021740 5.0kb downstream 5.0kb downstream 5000 false chr1: 6579225-6584224 Medicago truncatula
Medtr1g021740 10.0kb upstream 10.0kb upstream 14848 true chr1: 6584225-6599072 Medicago truncatula
Medtr1g021740 10.0kb upstream 10.0kb upstream 10000 false chr1: 6589073-6599072 Medicago truncatula
Medtr1g021740 10.0kb downstream 10.0kb downstream 14848 true chr1: 6574225-6589072 Medicago truncatula
Medtr1g021740 10.0kb downstream 10.0kb downstream 10000 false chr1: 6574225-6584224 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308570 5265 Fabidae View MSA
124068404 5270 Rosid View MSA
123646707 5271 Pentapetalae View MSA
122792488 5272 Eudicot View MSA
122050809 5273 Angiosperm View MSA
121344541 5274 Embryophyte View MSA
123428088 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.011     Low Low
cufflinks 1.227       High
cufflinks 0.276        
cufflinks 0.014     Low Low
cufflinks 1.386       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.044     Low  
cufflinks 0.54        
cufflinks 0.118        

0 Strain