Gene : Medtr1g022165 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR11722 - 60S RIBOSOMAL PROTEIN L13 Description:  60S ribosomal L13-like protein
Genomic Order:  905 Name:  ? Medtr1g022165
Secondary Identifier:  ? PAC:31099139
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g022165 0.5kb upstream 0.5kb upstream 3722 true chr1: 6899406-6903127 Medicago truncatula
Medtr1g022165 0.5kb upstream 0.5kb upstream 500 false chr1: 6899406-6899905 Medicago truncatula
Medtr1g022165 0.5kb downstream 0.5kb downstream 3722 true chr1: 6899906-6903627 Medicago truncatula
Medtr1g022165 0.5kb downstream 0.5kb downstream 500 false chr1: 6903128-6903627 Medicago truncatula
Medtr1g022165 1.0kb upstream 1.0kb upstream 4222 true chr1: 6898906-6903127 Medicago truncatula
Medtr1g022165 1.0kb upstream 1.0kb upstream 1000 false chr1: 6898906-6899905 Medicago truncatula
Medtr1g022165 1.0kb downstream 1.0kb downstream 4222 true chr1: 6899906-6904127 Medicago truncatula
Medtr1g022165 1.0kb downstream 1.0kb downstream 1000 false chr1: 6903128-6904127 Medicago truncatula
Medtr1g022165 2.0kb upstream 2.0kb upstream 5222 true chr1: 6897906-6903127 Medicago truncatula
Medtr1g022165 2.0kb upstream 2.0kb upstream 2000 false chr1: 6897906-6899905 Medicago truncatula
Medtr1g022165 2.0kb downstream 2.0kb downstream 5222 true chr1: 6899906-6905127 Medicago truncatula
Medtr1g022165 2.0kb downstream 2.0kb downstream 2000 false chr1: 6903128-6905127 Medicago truncatula
Medtr1g022165 5.0kb upstream 5.0kb upstream 8222 true chr1: 6894906-6903127 Medicago truncatula
Medtr1g022165 5.0kb upstream 5.0kb upstream 5000 false chr1: 6894906-6899905 Medicago truncatula
Medtr1g022165 5.0kb downstream 5.0kb downstream 8222 true chr1: 6899906-6908127 Medicago truncatula
Medtr1g022165 5.0kb downstream 5.0kb downstream 5000 false chr1: 6903128-6908127 Medicago truncatula
Medtr1g022165 10.0kb upstream 10.0kb upstream 13222 true chr1: 6889906-6903127 Medicago truncatula
Medtr1g022165 10.0kb upstream 10.0kb upstream 10000 false chr1: 6889906-6899905 Medicago truncatula
Medtr1g022165 10.0kb downstream 10.0kb downstream 13222 true chr1: 6899906-6913127 Medicago truncatula
Medtr1g022165 10.0kb downstream 10.0kb downstream 10000 false chr1: 6903128-6913127 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310849 5265 Fabidae View MSA
124069609 5270 Rosid View MSA
123744377 5271 Pentapetalae View MSA
122791356 5272 Eudicot View MSA
122049765 5273 Angiosperm View MSA
121344371 5274 Embryophyte View MSA
123426358 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 48.41     High  
cufflinks 35.398     High Low
cufflinks 43.944     High  
cufflinks 153.202     High High
cufflinks 55.209     High  
cufflinks 55.752     High  
cufflinks 72.493     High  
cufflinks 48.766     High  
cufflinks 108.837     High High

0 Strain