Gene : Medtr1g022030 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12320:SF1 - PROTEIN PHOSPHATASE PTC7 HOMOLOG Description:  protein phosphatase 2C family protein
Genomic Order:  889 Name:  ? Medtr1g022030
Secondary Identifier:  ? PAC:31093254
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g022030 0.5kb upstream 0.5kb upstream 5721 true chr1: 6777081-6782801 Medicago truncatula
Medtr1g022030 0.5kb upstream 0.5kb upstream 500 false chr1: 6782302-6782801 Medicago truncatula
Medtr1g022030 0.5kb downstream 0.5kb downstream 5721 true chr1: 6776581-6782301 Medicago truncatula
Medtr1g022030 0.5kb downstream 0.5kb downstream 500 false chr1: 6776581-6777080 Medicago truncatula
Medtr1g022030 1.0kb upstream 1.0kb upstream 6221 true chr1: 6777081-6783301 Medicago truncatula
Medtr1g022030 1.0kb upstream 1.0kb upstream 1000 false chr1: 6782302-6783301 Medicago truncatula
Medtr1g022030 1.0kb downstream 1.0kb downstream 6221 true chr1: 6776081-6782301 Medicago truncatula
Medtr1g022030 1.0kb downstream 1.0kb downstream 1000 false chr1: 6776081-6777080 Medicago truncatula
Medtr1g022030 2.0kb upstream 2.0kb upstream 7221 true chr1: 6777081-6784301 Medicago truncatula
Medtr1g022030 2.0kb upstream 2.0kb upstream 2000 false chr1: 6782302-6784301 Medicago truncatula
Medtr1g022030 2.0kb downstream 2.0kb downstream 7221 true chr1: 6775081-6782301 Medicago truncatula
Medtr1g022030 2.0kb downstream 2.0kb downstream 2000 false chr1: 6775081-6777080 Medicago truncatula
Medtr1g022030 5.0kb upstream 5.0kb upstream 10221 true chr1: 6777081-6787301 Medicago truncatula
Medtr1g022030 5.0kb upstream 5.0kb upstream 5000 false chr1: 6782302-6787301 Medicago truncatula
Medtr1g022030 5.0kb downstream 5.0kb downstream 10221 true chr1: 6772081-6782301 Medicago truncatula
Medtr1g022030 5.0kb downstream 5.0kb downstream 5000 false chr1: 6772081-6777080 Medicago truncatula
Medtr1g022030 10.0kb upstream 10.0kb upstream 15221 true chr1: 6777081-6792301 Medicago truncatula
Medtr1g022030 10.0kb upstream 10.0kb upstream 10000 false chr1: 6782302-6792301 Medicago truncatula
Medtr1g022030 10.0kb downstream 10.0kb downstream 15221 true chr1: 6767081-6782301 Medicago truncatula
Medtr1g022030 10.0kb downstream 10.0kb downstream 10000 false chr1: 6767081-6777080 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305578 5265 Fabidae View MSA
124069007 5270 Rosid View MSA
123743389 5271 Pentapetalae View MSA
122796886 5272 Eudicot View MSA
122043108 5273 Angiosperm View MSA
121351334 5274 Embryophyte View MSA
123428574 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.638       Low
cufflinks 8.117        
cufflinks 9.547        
cufflinks 12.83     High High
cufflinks 9.863        
cufflinks 4.803       Low
cufflinks 9.39        
cufflinks 8.581        
cufflinks 11.124     High  

0 Strain