Gene : Medtr1g021895 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12313//PTHR12313:SF10 - RNF5 Description:  zinc finger, C3HC4 type (RING finger) protein
Genomic Order:  874 Name:  ? Medtr1g021895
Secondary Identifier:  ? PAC:31096781
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g021895 0.5kb upstream 0.5kb upstream 2609 true chr1: 6658324-6660932 Medicago truncatula
Medtr1g021895 0.5kb upstream 0.5kb upstream 500 false chr1: 6660433-6660932 Medicago truncatula
Medtr1g021895 0.5kb downstream 0.5kb downstream 2609 true chr1: 6657824-6660432 Medicago truncatula
Medtr1g021895 0.5kb downstream 0.5kb downstream 500 false chr1: 6657824-6658323 Medicago truncatula
Medtr1g021895 1.0kb upstream 1.0kb upstream 3109 true chr1: 6658324-6661432 Medicago truncatula
Medtr1g021895 1.0kb upstream 1.0kb upstream 1000 false chr1: 6660433-6661432 Medicago truncatula
Medtr1g021895 1.0kb downstream 1.0kb downstream 3109 true chr1: 6657324-6660432 Medicago truncatula
Medtr1g021895 1.0kb downstream 1.0kb downstream 1000 false chr1: 6657324-6658323 Medicago truncatula
Medtr1g021895 2.0kb upstream 2.0kb upstream 4109 true chr1: 6658324-6662432 Medicago truncatula
Medtr1g021895 2.0kb upstream 2.0kb upstream 2000 false chr1: 6660433-6662432 Medicago truncatula
Medtr1g021895 2.0kb downstream 2.0kb downstream 4109 true chr1: 6656324-6660432 Medicago truncatula
Medtr1g021895 2.0kb downstream 2.0kb downstream 2000 false chr1: 6656324-6658323 Medicago truncatula
Medtr1g021895 5.0kb upstream 5.0kb upstream 7109 true chr1: 6658324-6665432 Medicago truncatula
Medtr1g021895 5.0kb upstream 5.0kb upstream 5000 false chr1: 6660433-6665432 Medicago truncatula
Medtr1g021895 5.0kb downstream 5.0kb downstream 7109 true chr1: 6653324-6660432 Medicago truncatula
Medtr1g021895 5.0kb downstream 5.0kb downstream 5000 false chr1: 6653324-6658323 Medicago truncatula
Medtr1g021895 10.0kb upstream 10.0kb upstream 12109 true chr1: 6658324-6670432 Medicago truncatula
Medtr1g021895 10.0kb upstream 10.0kb upstream 10000 false chr1: 6660433-6670432 Medicago truncatula
Medtr1g021895 10.0kb downstream 10.0kb downstream 12109 true chr1: 6648324-6660432 Medicago truncatula
Medtr1g021895 10.0kb downstream 10.0kb downstream 10000 false chr1: 6648324-6658323 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303958 5265 Fabidae View MSA
124066658 5270 Rosid View MSA
123750017 5271 Pentapetalae View MSA
122793132 5272 Eudicot View MSA
122043579 5273 Angiosperm View MSA
121350090 5274 Embryophyte View MSA
123428794 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.521     High  
cufflinks 10.566     High Low
cufflinks 16.153     High  
cufflinks 33.742     High High
cufflinks 10.356     High Low
cufflinks 21.297     High  
cufflinks 34.074     High High
cufflinks 12.245     High  
cufflinks 24.222     High  

0 Strain