Gene : Medtr1g022345 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR13711//PTHR13711:SF199 - SWI/SNF-RELATED CHROMATIN BINDING PROTEIN Description:  FACT complex subunit SSRP1
Genomic Order:  929 Name:  ? Medtr1g022345
Secondary Identifier:  ? PAC:31100810
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g022345 0.5kb upstream 0.5kb upstream 6755 true chr1: 7068028-7074782 Medicago truncatula
Medtr1g022345 0.5kb upstream 0.5kb upstream 500 false chr1: 7068028-7068527 Medicago truncatula
Medtr1g022345 0.5kb downstream 0.5kb downstream 6755 true chr1: 7068528-7075282 Medicago truncatula
Medtr1g022345 0.5kb downstream 0.5kb downstream 500 false chr1: 7074783-7075282 Medicago truncatula
Medtr1g022345 1.0kb upstream 1.0kb upstream 7255 true chr1: 7067528-7074782 Medicago truncatula
Medtr1g022345 1.0kb upstream 1.0kb upstream 1000 false chr1: 7067528-7068527 Medicago truncatula
Medtr1g022345 1.0kb downstream 1.0kb downstream 7255 true chr1: 7068528-7075782 Medicago truncatula
Medtr1g022345 1.0kb downstream 1.0kb downstream 1000 false chr1: 7074783-7075782 Medicago truncatula
Medtr1g022345 2.0kb upstream 2.0kb upstream 8255 true chr1: 7066528-7074782 Medicago truncatula
Medtr1g022345 2.0kb upstream 2.0kb upstream 2000 false chr1: 7066528-7068527 Medicago truncatula
Medtr1g022345 2.0kb downstream 2.0kb downstream 8255 true chr1: 7068528-7076782 Medicago truncatula
Medtr1g022345 2.0kb downstream 2.0kb downstream 2000 false chr1: 7074783-7076782 Medicago truncatula
Medtr1g022345 5.0kb upstream 5.0kb upstream 11255 true chr1: 7063528-7074782 Medicago truncatula
Medtr1g022345 5.0kb upstream 5.0kb upstream 5000 false chr1: 7063528-7068527 Medicago truncatula
Medtr1g022345 5.0kb downstream 5.0kb downstream 11255 true chr1: 7068528-7079782 Medicago truncatula
Medtr1g022345 5.0kb downstream 5.0kb downstream 5000 false chr1: 7074783-7079782 Medicago truncatula
Medtr1g022345 10.0kb upstream 10.0kb upstream 16255 true chr1: 7058528-7074782 Medicago truncatula
Medtr1g022345 10.0kb upstream 10.0kb upstream 10000 false chr1: 7058528-7068527 Medicago truncatula
Medtr1g022345 10.0kb downstream 10.0kb downstream 16255 true chr1: 7068528-7084782 Medicago truncatula
Medtr1g022345 10.0kb downstream 10.0kb downstream 10000 false chr1: 7074783-7084782 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302109 5265 Fabidae View MSA
124060640 5270 Rosid View MSA
123744635 5271 Pentapetalae View MSA
122790158 5272 Eudicot View MSA
122041570 5273 Angiosperm View MSA
121347609 5274 Embryophyte View MSA
123424150 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.694        
cufflinks 5.027        
cufflinks 6.444        
cufflinks 1.481       Low
cufflinks 7.571       High
cufflinks 1.192       Low
cufflinks 2.706        
cufflinks 5.458        
cufflinks 2.979        

0 Strain