Gene : Medtr1g022250 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR23070//PTHR23070:SF19 - BCS1 AAA-TYPE ATPASE Description:  P-loop nucleoside triphosphate hydrolase superfamily protein
Genomic Order:  914 Name:  ? Medtr1g022250
Secondary Identifier:  ? PAC:31092989
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g022250 0.5kb upstream 0.5kb upstream 2343 true chr1: 6969864-6972206 Medicago truncatula
Medtr1g022250 0.5kb upstream 0.5kb upstream 500 false chr1: 6969864-6970363 Medicago truncatula
Medtr1g022250 0.5kb downstream 0.5kb downstream 2343 true chr1: 6970364-6972706 Medicago truncatula
Medtr1g022250 0.5kb downstream 0.5kb downstream 500 false chr1: 6972207-6972706 Medicago truncatula
Medtr1g022250 1.0kb upstream 1.0kb upstream 2843 true chr1: 6969364-6972206 Medicago truncatula
Medtr1g022250 1.0kb upstream 1.0kb upstream 1000 false chr1: 6969364-6970363 Medicago truncatula
Medtr1g022250 1.0kb downstream 1.0kb downstream 2843 true chr1: 6970364-6973206 Medicago truncatula
Medtr1g022250 1.0kb downstream 1.0kb downstream 1000 false chr1: 6972207-6973206 Medicago truncatula
Medtr1g022250 2.0kb upstream 2.0kb upstream 3843 true chr1: 6968364-6972206 Medicago truncatula
Medtr1g022250 2.0kb upstream 2.0kb upstream 2000 false chr1: 6968364-6970363 Medicago truncatula
Medtr1g022250 2.0kb downstream 2.0kb downstream 3843 true chr1: 6970364-6974206 Medicago truncatula
Medtr1g022250 2.0kb downstream 2.0kb downstream 2000 false chr1: 6972207-6974206 Medicago truncatula
Medtr1g022250 5.0kb upstream 5.0kb upstream 6843 true chr1: 6965364-6972206 Medicago truncatula
Medtr1g022250 5.0kb upstream 5.0kb upstream 5000 false chr1: 6965364-6970363 Medicago truncatula
Medtr1g022250 5.0kb downstream 5.0kb downstream 6843 true chr1: 6970364-6977206 Medicago truncatula
Medtr1g022250 5.0kb downstream 5.0kb downstream 5000 false chr1: 6972207-6977206 Medicago truncatula
Medtr1g022250 10.0kb upstream 10.0kb upstream 11843 true chr1: 6960364-6972206 Medicago truncatula
Medtr1g022250 10.0kb upstream 10.0kb upstream 10000 false chr1: 6960364-6970363 Medicago truncatula
Medtr1g022250 10.0kb downstream 10.0kb downstream 11843 true chr1: 6970364-6982206 Medicago truncatula
Medtr1g022250 10.0kb downstream 10.0kb downstream 10000 false chr1: 6972207-6982206 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122794526 5272 Eudicot View MSA
122301938 5265 Fabidae View MSA
124072543 5270 Rosid View MSA
123751074 5271 Pentapetalae View MSA
122051618 5273 Angiosperm View MSA
121350294 5274 Embryophyte View MSA
123428466 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.323       High
cufflinks 2.355        
cufflinks 1.644        
cufflinks 0.619       Low
cufflinks 1.167        
cufflinks 2.21        
cufflinks 1.865        
cufflinks 2.391        
cufflinks 1.817        

0 Strain