Gene : Medtr1g010080 M. truncatula Mt4.0v1
Defline:  (1 of 3) PF09366 - Protein of unknown function (DUF1997) (DUF1997) Description:  DUF1997 family protein
Genomic Order:  228 Name:  ? Medtr1g010080
Secondary Identifier:  ? PAC:31094543
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g010080 0.5kb upstream 0.5kb upstream 4424 true chr1: 1728690-1733113 Medicago truncatula
Medtr1g010080 0.5kb upstream 0.5kb upstream 500 false chr1: 1728690-1729189 Medicago truncatula
Medtr1g010080 0.5kb downstream 0.5kb downstream 4424 true chr1: 1729190-1733613 Medicago truncatula
Medtr1g010080 0.5kb downstream 0.5kb downstream 500 false chr1: 1733114-1733613 Medicago truncatula
Medtr1g010080 1.0kb upstream 1.0kb upstream 4924 true chr1: 1728190-1733113 Medicago truncatula
Medtr1g010080 1.0kb upstream 1.0kb upstream 1000 false chr1: 1728190-1729189 Medicago truncatula
Medtr1g010080 1.0kb downstream 1.0kb downstream 4924 true chr1: 1729190-1734113 Medicago truncatula
Medtr1g010080 1.0kb downstream 1.0kb downstream 1000 false chr1: 1733114-1734113 Medicago truncatula
Medtr1g010080 2.0kb upstream 2.0kb upstream 5924 true chr1: 1727190-1733113 Medicago truncatula
Medtr1g010080 2.0kb upstream 2.0kb upstream 2000 false chr1: 1727190-1729189 Medicago truncatula
Medtr1g010080 2.0kb downstream 2.0kb downstream 5924 true chr1: 1729190-1735113 Medicago truncatula
Medtr1g010080 2.0kb downstream 2.0kb downstream 2000 false chr1: 1733114-1735113 Medicago truncatula
Medtr1g010080 5.0kb upstream 5.0kb upstream 8924 true chr1: 1724190-1733113 Medicago truncatula
Medtr1g010080 5.0kb upstream 5.0kb upstream 5000 false chr1: 1724190-1729189 Medicago truncatula
Medtr1g010080 5.0kb downstream 5.0kb downstream 8924 true chr1: 1729190-1738113 Medicago truncatula
Medtr1g010080 5.0kb downstream 5.0kb downstream 5000 false chr1: 1733114-1738113 Medicago truncatula
Medtr1g010080 10.0kb upstream 10.0kb upstream 13924 true chr1: 1719190-1733113 Medicago truncatula
Medtr1g010080 10.0kb upstream 10.0kb upstream 10000 false chr1: 1719190-1729189 Medicago truncatula
Medtr1g010080 10.0kb downstream 10.0kb downstream 13924 true chr1: 1729190-1743113 Medicago truncatula
Medtr1g010080 10.0kb downstream 10.0kb downstream 10000 false chr1: 1733114-1743113 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299585 5265 Fabidae View MSA
124068915 5270 Rosid View MSA
123740182 5271 Pentapetalae View MSA
122791833 5272 Eudicot View MSA
122045233 5273 Angiosperm View MSA
121346827 5274 Embryophyte View MSA
123423879 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.052     Low  
cufflinks 2.99        
cufflinks 3.438        
cufflinks 0.006     Low Low
cufflinks 3.418        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.015     Low  
cufflinks 3.695        
cufflinks 0.004     Low Low

0 Strain