Gene : Medtr1g009980 M. truncatula Mt4.0v1
Defline:  (1 of 14) PF04755 - PAP_fibrillin (PAP_fibrillin) Description:  plastid lipid-associated protein
Genomic Order:  219 Name:  ? Medtr1g009980
Secondary Identifier:  ? PAC:31097396
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g009980 0.5kb upstream 0.5kb upstream 4935 true chr1: 1659745-1664679 Medicago truncatula
Medtr1g009980 0.5kb upstream 0.5kb upstream 500 false chr1: 1659745-1660244 Medicago truncatula
Medtr1g009980 0.5kb downstream 0.5kb downstream 4935 true chr1: 1660245-1665179 Medicago truncatula
Medtr1g009980 0.5kb downstream 0.5kb downstream 500 false chr1: 1664680-1665179 Medicago truncatula
Medtr1g009980 1.0kb upstream 1.0kb upstream 5435 true chr1: 1659245-1664679 Medicago truncatula
Medtr1g009980 1.0kb upstream 1.0kb upstream 1000 false chr1: 1659245-1660244 Medicago truncatula
Medtr1g009980 1.0kb downstream 1.0kb downstream 5435 true chr1: 1660245-1665679 Medicago truncatula
Medtr1g009980 1.0kb downstream 1.0kb downstream 1000 false chr1: 1664680-1665679 Medicago truncatula
Medtr1g009980 2.0kb upstream 2.0kb upstream 6435 true chr1: 1658245-1664679 Medicago truncatula
Medtr1g009980 2.0kb upstream 2.0kb upstream 2000 false chr1: 1658245-1660244 Medicago truncatula
Medtr1g009980 2.0kb downstream 2.0kb downstream 6435 true chr1: 1660245-1666679 Medicago truncatula
Medtr1g009980 2.0kb downstream 2.0kb downstream 2000 false chr1: 1664680-1666679 Medicago truncatula
Medtr1g009980 5.0kb upstream 5.0kb upstream 9435 true chr1: 1655245-1664679 Medicago truncatula
Medtr1g009980 5.0kb upstream 5.0kb upstream 5000 false chr1: 1655245-1660244 Medicago truncatula
Medtr1g009980 5.0kb downstream 5.0kb downstream 9435 true chr1: 1660245-1669679 Medicago truncatula
Medtr1g009980 5.0kb downstream 5.0kb downstream 5000 false chr1: 1664680-1669679 Medicago truncatula
Medtr1g009980 10.0kb upstream 10.0kb upstream 14435 true chr1: 1650245-1664679 Medicago truncatula
Medtr1g009980 10.0kb upstream 10.0kb upstream 10000 false chr1: 1650245-1660244 Medicago truncatula
Medtr1g009980 10.0kb downstream 10.0kb downstream 14435 true chr1: 1660245-1674679 Medicago truncatula
Medtr1g009980 10.0kb downstream 10.0kb downstream 10000 false chr1: 1664680-1674679 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308234 5265 Fabidae View MSA
124060724 5270 Rosid View MSA
123739839 5271 Pentapetalae View MSA
122789200 5272 Eudicot View MSA
122042948 5273 Angiosperm View MSA
121347076 5274 Embryophyte View MSA
123428085 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.903        
cufflinks 23.805     High  
cufflinks 20.348     High  
cufflinks 2.02        
cufflinks 35.035     High High
cufflinks 0.64       Low
cufflinks 0.862        
cufflinks 24.734     High High
cufflinks 0.958        

0 Strain