Gene : Medtr1g009960 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR31042:SF22 - CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN Description:  core-2/I-branching enzyme
Genomic Order:  217 Name:  ? Medtr1g009960
Secondary Identifier:  ? PAC:31093165
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g009960 0.5kb upstream 0.5kb upstream 5966 true chr1: 1649119-1655084 Medicago truncatula
Medtr1g009960 0.5kb upstream 0.5kb upstream 500 false chr1: 1654585-1655084 Medicago truncatula
Medtr1g009960 0.5kb downstream 0.5kb downstream 5966 true chr1: 1648619-1654584 Medicago truncatula
Medtr1g009960 0.5kb downstream 0.5kb downstream 500 false chr1: 1648619-1649118 Medicago truncatula
Medtr1g009960 1.0kb upstream 1.0kb upstream 6466 true chr1: 1649119-1655584 Medicago truncatula
Medtr1g009960 1.0kb upstream 1.0kb upstream 1000 false chr1: 1654585-1655584 Medicago truncatula
Medtr1g009960 1.0kb downstream 1.0kb downstream 6466 true chr1: 1648119-1654584 Medicago truncatula
Medtr1g009960 1.0kb downstream 1.0kb downstream 1000 false chr1: 1648119-1649118 Medicago truncatula
Medtr1g009960 2.0kb upstream 2.0kb upstream 7466 true chr1: 1649119-1656584 Medicago truncatula
Medtr1g009960 2.0kb upstream 2.0kb upstream 2000 false chr1: 1654585-1656584 Medicago truncatula
Medtr1g009960 2.0kb downstream 2.0kb downstream 7466 true chr1: 1647119-1654584 Medicago truncatula
Medtr1g009960 2.0kb downstream 2.0kb downstream 2000 false chr1: 1647119-1649118 Medicago truncatula
Medtr1g009960 5.0kb upstream 5.0kb upstream 10466 true chr1: 1649119-1659584 Medicago truncatula
Medtr1g009960 5.0kb upstream 5.0kb upstream 5000 false chr1: 1654585-1659584 Medicago truncatula
Medtr1g009960 5.0kb downstream 5.0kb downstream 10466 true chr1: 1644119-1654584 Medicago truncatula
Medtr1g009960 5.0kb downstream 5.0kb downstream 5000 false chr1: 1644119-1649118 Medicago truncatula
Medtr1g009960 10.0kb upstream 10.0kb upstream 15466 true chr1: 1649119-1664584 Medicago truncatula
Medtr1g009960 10.0kb upstream 10.0kb upstream 10000 false chr1: 1654585-1664584 Medicago truncatula
Medtr1g009960 10.0kb downstream 10.0kb downstream 15466 true chr1: 1639119-1654584 Medicago truncatula
Medtr1g009960 10.0kb downstream 10.0kb downstream 10000 false chr1: 1639119-1649118 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312440 5265 Fabidae View MSA
124065434 5270 Rosid View MSA
123745528 5271 Pentapetalae View MSA
122791834 5272 Eudicot View MSA
122045211 5273 Angiosperm View MSA
121345766 5274 Embryophyte View MSA
123428085 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.782        
cufflinks 4.026        
cufflinks 2.681        
cufflinks 1.504       Low
cufflinks 3.981        
cufflinks 1.297       Low
cufflinks 5.558       High
cufflinks 2.445        
cufflinks 2.322        

0 Strain