Gene : Medtr1g011720 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12121:SF48 - CARBON CATABOLITE REPRESSOR PROTEIN 4 HOMOLOG 6 Description:  carbon catabolite repressor-like protein
Genomic Order:  285 Name:  ? Medtr1g011720
Secondary Identifier:  ? PAC:31099581
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g011720 0.5kb upstream 0.5kb upstream 10892 true chr1: 2193029-2203920 Medicago truncatula
Medtr1g011720 0.5kb upstream 0.5kb upstream 500 false chr1: 2193029-2193528 Medicago truncatula
Medtr1g011720 0.5kb downstream 0.5kb downstream 10892 true chr1: 2193529-2204420 Medicago truncatula
Medtr1g011720 0.5kb downstream 0.5kb downstream 500 false chr1: 2203921-2204420 Medicago truncatula
Medtr1g011720 1.0kb upstream 1.0kb upstream 11392 true chr1: 2192529-2203920 Medicago truncatula
Medtr1g011720 1.0kb upstream 1.0kb upstream 1000 false chr1: 2192529-2193528 Medicago truncatula
Medtr1g011720 1.0kb downstream 1.0kb downstream 11392 true chr1: 2193529-2204920 Medicago truncatula
Medtr1g011720 1.0kb downstream 1.0kb downstream 1000 false chr1: 2203921-2204920 Medicago truncatula
Medtr1g011720 2.0kb upstream 2.0kb upstream 12392 true chr1: 2191529-2203920 Medicago truncatula
Medtr1g011720 2.0kb upstream 2.0kb upstream 2000 false chr1: 2191529-2193528 Medicago truncatula
Medtr1g011720 2.0kb downstream 2.0kb downstream 12392 true chr1: 2193529-2205920 Medicago truncatula
Medtr1g011720 2.0kb downstream 2.0kb downstream 2000 false chr1: 2203921-2205920 Medicago truncatula
Medtr1g011720 5.0kb upstream 5.0kb upstream 15392 true chr1: 2188529-2203920 Medicago truncatula
Medtr1g011720 5.0kb upstream 5.0kb upstream 5000 false chr1: 2188529-2193528 Medicago truncatula
Medtr1g011720 5.0kb downstream 5.0kb downstream 15392 true chr1: 2193529-2208920 Medicago truncatula
Medtr1g011720 5.0kb downstream 5.0kb downstream 5000 false chr1: 2203921-2208920 Medicago truncatula
Medtr1g011720 10.0kb upstream 10.0kb upstream 20392 true chr1: 2183529-2203920 Medicago truncatula
Medtr1g011720 10.0kb upstream 10.0kb upstream 10000 false chr1: 2183529-2193528 Medicago truncatula
Medtr1g011720 10.0kb downstream 10.0kb downstream 20392 true chr1: 2193529-2213920 Medicago truncatula
Medtr1g011720 10.0kb downstream 10.0kb downstream 10000 false chr1: 2203921-2213920 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307180 5265 Fabidae View MSA
124066048 5270 Rosid View MSA
123737672 5271 Pentapetalae View MSA
122788229 5272 Eudicot View MSA
122041541 5273 Angiosperm View MSA
121350616 5274 Embryophyte View MSA
123428031 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.688       High
cufflinks 0.476        
cufflinks 0.444        
cufflinks 0.1       Low
cufflinks 0.477        
cufflinks 0.068     Low Low
cufflinks 0.233        
cufflinks 0.409        
cufflinks 0.254        

0 Strain