Gene : Medtr1g012600 M. truncatula Mt4.0v1
Description:  hypothetical protein Genomic Order:  333
Name:  ? Medtr1g012600 Secondary Identifier:  ? PAC:31096571
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g012600 0.5kb upstream 0.5kb upstream 5779 true chr1: 2548997-2554775 Medicago truncatula
Medtr1g012600 0.5kb upstream 0.5kb upstream 500 false chr1: 2548997-2549496 Medicago truncatula
Medtr1g012600 0.5kb downstream 0.5kb downstream 5779 true chr1: 2549497-2555275 Medicago truncatula
Medtr1g012600 0.5kb downstream 0.5kb downstream 500 false chr1: 2554776-2555275 Medicago truncatula
Medtr1g012600 1.0kb upstream 1.0kb upstream 6279 true chr1: 2548497-2554775 Medicago truncatula
Medtr1g012600 1.0kb upstream 1.0kb upstream 1000 false chr1: 2548497-2549496 Medicago truncatula
Medtr1g012600 1.0kb downstream 1.0kb downstream 6279 true chr1: 2549497-2555775 Medicago truncatula
Medtr1g012600 1.0kb downstream 1.0kb downstream 1000 false chr1: 2554776-2555775 Medicago truncatula
Medtr1g012600 2.0kb upstream 2.0kb upstream 7279 true chr1: 2547497-2554775 Medicago truncatula
Medtr1g012600 2.0kb upstream 2.0kb upstream 2000 false chr1: 2547497-2549496 Medicago truncatula
Medtr1g012600 2.0kb downstream 2.0kb downstream 7279 true chr1: 2549497-2556775 Medicago truncatula
Medtr1g012600 2.0kb downstream 2.0kb downstream 2000 false chr1: 2554776-2556775 Medicago truncatula
Medtr1g012600 5.0kb upstream 5.0kb upstream 10279 true chr1: 2544497-2554775 Medicago truncatula
Medtr1g012600 5.0kb upstream 5.0kb upstream 5000 false chr1: 2544497-2549496 Medicago truncatula
Medtr1g012600 5.0kb downstream 5.0kb downstream 10279 true chr1: 2549497-2559775 Medicago truncatula
Medtr1g012600 5.0kb downstream 5.0kb downstream 5000 false chr1: 2554776-2559775 Medicago truncatula
Medtr1g012600 10.0kb upstream 10.0kb upstream 15279 true chr1: 2539497-2554775 Medicago truncatula
Medtr1g012600 10.0kb upstream 10.0kb upstream 10000 false chr1: 2539497-2549496 Medicago truncatula
Medtr1g012600 10.0kb downstream 10.0kb downstream 15279 true chr1: 2549497-2564775 Medicago truncatula
Medtr1g012600 10.0kb downstream 10.0kb downstream 10000 false chr1: 2554776-2564775 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314513 5265 Fabidae View MSA
124068722 5270 Rosid View MSA
123752628 5271 Pentapetalae View MSA
122791524 5272 Eudicot View MSA
122043205 5273 Angiosperm View MSA
121348620 5274 Embryophyte View MSA
123380941 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.365        
cufflinks 0.266       Low
cufflinks 0.48       High
cufflinks 0.316        
cufflinks 0.325        
cufflinks 0.535       High
cufflinks 0.423        
cufflinks 0.282       Low
cufflinks 0.341        

0 Strain