Gene : Medtr1g013450 M. truncatula Mt4.0v1
Defline:  (1 of 9) PF00643//PF06203 - B-box zinc finger (zf-B_box) // CCT motif (CCT) Description:  zinc finger constans-like protein
Genomic Order:  443 Name:  ? Medtr1g013450
Secondary Identifier:  ? PAC:31098981
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g013450 0.5kb upstream 0.5kb upstream 1554 true chr1: 3419850-3421403 Medicago truncatula
Medtr1g013450 0.5kb upstream 0.5kb upstream 500 false chr1: 3420904-3421403 Medicago truncatula
Medtr1g013450 0.5kb downstream 0.5kb downstream 1554 true chr1: 3419350-3420903 Medicago truncatula
Medtr1g013450 0.5kb downstream 0.5kb downstream 500 false chr1: 3419350-3419849 Medicago truncatula
Medtr1g013450 1.0kb upstream 1.0kb upstream 2054 true chr1: 3419850-3421903 Medicago truncatula
Medtr1g013450 1.0kb upstream 1.0kb upstream 1000 false chr1: 3420904-3421903 Medicago truncatula
Medtr1g013450 1.0kb downstream 1.0kb downstream 2054 true chr1: 3418850-3420903 Medicago truncatula
Medtr1g013450 1.0kb downstream 1.0kb downstream 1000 false chr1: 3418850-3419849 Medicago truncatula
Medtr1g013450 2.0kb upstream 2.0kb upstream 3054 true chr1: 3419850-3422903 Medicago truncatula
Medtr1g013450 2.0kb upstream 2.0kb upstream 2000 false chr1: 3420904-3422903 Medicago truncatula
Medtr1g013450 2.0kb downstream 2.0kb downstream 3054 true chr1: 3417850-3420903 Medicago truncatula
Medtr1g013450 2.0kb downstream 2.0kb downstream 2000 false chr1: 3417850-3419849 Medicago truncatula
Medtr1g013450 5.0kb upstream 5.0kb upstream 6054 true chr1: 3419850-3425903 Medicago truncatula
Medtr1g013450 5.0kb upstream 5.0kb upstream 5000 false chr1: 3420904-3425903 Medicago truncatula
Medtr1g013450 5.0kb downstream 5.0kb downstream 6054 true chr1: 3414850-3420903 Medicago truncatula
Medtr1g013450 5.0kb downstream 5.0kb downstream 5000 false chr1: 3414850-3419849 Medicago truncatula
Medtr1g013450 10.0kb upstream 10.0kb upstream 11054 true chr1: 3419850-3430903 Medicago truncatula
Medtr1g013450 10.0kb upstream 10.0kb upstream 10000 false chr1: 3420904-3430903 Medicago truncatula
Medtr1g013450 10.0kb downstream 10.0kb downstream 11054 true chr1: 3409850-3420903 Medicago truncatula
Medtr1g013450 10.0kb downstream 10.0kb downstream 10000 false chr1: 3409850-3419849 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315046 5265 Fabidae View MSA
124065219 5270 Rosid View MSA
123752107 5271 Pentapetalae View MSA
122792098 5272 Eudicot View MSA
122049836 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121345556 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.188       Low
cufflinks 182.36     High High
cufflinks 76.917     High  
cufflinks 1.184        
cufflinks 101.223     High  
cufflinks 0.174       Low
cufflinks 1.315        
cufflinks 149.972     High High
cufflinks 3.01        

0 Strain