Gene : Medtr1g013030 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR15430 - FKBP-ASSOCIATED PROTEIN Description:  aberrant root formation protein
Genomic Order:  361 Name:  ? Medtr1g013030
Secondary Identifier:  ? PAC:31093510
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g013030 0.5kb upstream 0.5kb upstream 3075 true chr1: 2797987-2801061 Medicago truncatula
Medtr1g013030 0.5kb upstream 0.5kb upstream 500 false chr1: 2797987-2798486 Medicago truncatula
Medtr1g013030 0.5kb downstream 0.5kb downstream 3075 true chr1: 2798487-2801561 Medicago truncatula
Medtr1g013030 0.5kb downstream 0.5kb downstream 500 false chr1: 2801062-2801561 Medicago truncatula
Medtr1g013030 1.0kb upstream 1.0kb upstream 3575 true chr1: 2797487-2801061 Medicago truncatula
Medtr1g013030 1.0kb upstream 1.0kb upstream 1000 false chr1: 2797487-2798486 Medicago truncatula
Medtr1g013030 1.0kb downstream 1.0kb downstream 3575 true chr1: 2798487-2802061 Medicago truncatula
Medtr1g013030 1.0kb downstream 1.0kb downstream 1000 false chr1: 2801062-2802061 Medicago truncatula
Medtr1g013030 2.0kb upstream 2.0kb upstream 4575 true chr1: 2796487-2801061 Medicago truncatula
Medtr1g013030 2.0kb upstream 2.0kb upstream 2000 false chr1: 2796487-2798486 Medicago truncatula
Medtr1g013030 2.0kb downstream 2.0kb downstream 4575 true chr1: 2798487-2803061 Medicago truncatula
Medtr1g013030 2.0kb downstream 2.0kb downstream 2000 false chr1: 2801062-2803061 Medicago truncatula
Medtr1g013030 5.0kb upstream 5.0kb upstream 7575 true chr1: 2793487-2801061 Medicago truncatula
Medtr1g013030 5.0kb upstream 5.0kb upstream 5000 false chr1: 2793487-2798486 Medicago truncatula
Medtr1g013030 5.0kb downstream 5.0kb downstream 7575 true chr1: 2798487-2806061 Medicago truncatula
Medtr1g013030 5.0kb downstream 5.0kb downstream 5000 false chr1: 2801062-2806061 Medicago truncatula
Medtr1g013030 10.0kb upstream 10.0kb upstream 12575 true chr1: 2788487-2801061 Medicago truncatula
Medtr1g013030 10.0kb upstream 10.0kb upstream 10000 false chr1: 2788487-2798486 Medicago truncatula
Medtr1g013030 10.0kb downstream 10.0kb downstream 12575 true chr1: 2798487-2811061 Medicago truncatula
Medtr1g013030 10.0kb downstream 10.0kb downstream 10000 false chr1: 2801062-2811061 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121657458 5273 Angiosperm View MSA
122298619 5265 Fabidae View MSA
124039339 5270 Rosid View MSA
123611259 5271 Pentapetalae View MSA
122645831 5272 Eudicot View MSA
120929499 5274 Embryophyte View MSA
122970057 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.017     Low  
cufflinks 0.022     Low  
cufflinks 0.021     Low  
cufflinks 0.046     Low High
cufflinks 0.036     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.028     Low  
cufflinks 0.023     Low  
cufflinks 0.012     Low Low

0 Strain