Gene : Medtr1g014710 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR22763:SF50 - E3 UBIQUITIN-PROTEIN LIGASE AIP2 Description:  RING-finger ubiquitin ligase
Genomic Order:  455 Name:  ? Medtr1g014710
Secondary Identifier:  ? PAC:31095631
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-7511 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g014710 0.5kb upstream 0.5kb upstream 4443 true chr1: 3505241-3509683 Medicago truncatula
Medtr1g014710 0.5kb upstream 0.5kb upstream 500 false chr1: 3505241-3505740 Medicago truncatula
Medtr1g014710 0.5kb downstream 0.5kb downstream 4443 true chr1: 3505741-3510183 Medicago truncatula
Medtr1g014710 0.5kb downstream 0.5kb downstream 500 false chr1: 3509684-3510183 Medicago truncatula
Medtr1g014710 1.0kb upstream 1.0kb upstream 4943 true chr1: 3504741-3509683 Medicago truncatula
Medtr1g014710 1.0kb upstream 1.0kb upstream 1000 false chr1: 3504741-3505740 Medicago truncatula
Medtr1g014710 1.0kb downstream 1.0kb downstream 4943 true chr1: 3505741-3510683 Medicago truncatula
Medtr1g014710 1.0kb downstream 1.0kb downstream 1000 false chr1: 3509684-3510683 Medicago truncatula
Medtr1g014710 2.0kb upstream 2.0kb upstream 5943 true chr1: 3503741-3509683 Medicago truncatula
Medtr1g014710 2.0kb upstream 2.0kb upstream 2000 false chr1: 3503741-3505740 Medicago truncatula
Medtr1g014710 2.0kb downstream 2.0kb downstream 5943 true chr1: 3505741-3511683 Medicago truncatula
Medtr1g014710 2.0kb downstream 2.0kb downstream 2000 false chr1: 3509684-3511683 Medicago truncatula
Medtr1g014710 5.0kb upstream 5.0kb upstream 8943 true chr1: 3500741-3509683 Medicago truncatula
Medtr1g014710 5.0kb upstream 5.0kb upstream 5000 false chr1: 3500741-3505740 Medicago truncatula
Medtr1g014710 5.0kb downstream 5.0kb downstream 8943 true chr1: 3505741-3514683 Medicago truncatula
Medtr1g014710 5.0kb downstream 5.0kb downstream 5000 false chr1: 3509684-3514683 Medicago truncatula
Medtr1g014710 10.0kb upstream 10.0kb upstream 13943 true chr1: 3495741-3509683 Medicago truncatula
Medtr1g014710 10.0kb upstream 10.0kb upstream 10000 false chr1: 3495741-3505740 Medicago truncatula
Medtr1g014710 10.0kb downstream 10.0kb downstream 13943 true chr1: 3505741-3519683 Medicago truncatula
Medtr1g014710 10.0kb downstream 10.0kb downstream 10000 false chr1: 3509684-3519683 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026169 5273 Angiosperm View MSA
122312230 5265 Fabidae View MSA
124060743 5270 Rosid View MSA
123738156 5271 Pentapetalae View MSA
122787757 5272 Eudicot View MSA
123429130 5275 Viridiplantae View MSA
121350344 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.864        
cufflinks 8.067        
cufflinks 6.502        
cufflinks 12.626     High High
cufflinks 5.834        
cufflinks 4.189       Low
cufflinks 8.886        
cufflinks 7.543        
cufflinks 11.185     High High

0 Strain