Gene : Medtr1g014690 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR10108:SF708 - TOCOPHEROL O-METHYLTRANSFERASE, CHLOROPLASTIC Description:  gamma-tocopherol methyltransferase
Genomic Order:  453 Name:  ? Medtr1g014690
Secondary Identifier:  ? PAC:31097081
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-1422 Medicago truncatula pathologic  
Mtruncatula PWY-7436 Medicago truncatula pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g014690 0.5kb upstream 0.5kb upstream 6003 true chr1: 3494104-3500106 Medicago truncatula
Medtr1g014690 0.5kb upstream 0.5kb upstream 500 false chr1: 3494104-3494603 Medicago truncatula
Medtr1g014690 0.5kb downstream 0.5kb downstream 6003 true chr1: 3494604-3500606 Medicago truncatula
Medtr1g014690 0.5kb downstream 0.5kb downstream 500 false chr1: 3500107-3500606 Medicago truncatula
Medtr1g014690 1.0kb upstream 1.0kb upstream 6503 true chr1: 3493604-3500106 Medicago truncatula
Medtr1g014690 1.0kb upstream 1.0kb upstream 1000 false chr1: 3493604-3494603 Medicago truncatula
Medtr1g014690 1.0kb downstream 1.0kb downstream 6503 true chr1: 3494604-3501106 Medicago truncatula
Medtr1g014690 1.0kb downstream 1.0kb downstream 1000 false chr1: 3500107-3501106 Medicago truncatula
Medtr1g014690 2.0kb upstream 2.0kb upstream 7503 true chr1: 3492604-3500106 Medicago truncatula
Medtr1g014690 2.0kb upstream 2.0kb upstream 2000 false chr1: 3492604-3494603 Medicago truncatula
Medtr1g014690 2.0kb downstream 2.0kb downstream 7503 true chr1: 3494604-3502106 Medicago truncatula
Medtr1g014690 2.0kb downstream 2.0kb downstream 2000 false chr1: 3500107-3502106 Medicago truncatula
Medtr1g014690 5.0kb upstream 5.0kb upstream 10503 true chr1: 3489604-3500106 Medicago truncatula
Medtr1g014690 5.0kb upstream 5.0kb upstream 5000 false chr1: 3489604-3494603 Medicago truncatula
Medtr1g014690 5.0kb downstream 5.0kb downstream 10503 true chr1: 3494604-3505106 Medicago truncatula
Medtr1g014690 5.0kb downstream 5.0kb downstream 5000 false chr1: 3500107-3505106 Medicago truncatula
Medtr1g014690 10.0kb upstream 10.0kb upstream 15503 true chr1: 3484604-3500106 Medicago truncatula
Medtr1g014690 10.0kb upstream 10.0kb upstream 10000 false chr1: 3484604-3494603 Medicago truncatula
Medtr1g014690 10.0kb downstream 10.0kb downstream 15503 true chr1: 3494604-3510106 Medicago truncatula
Medtr1g014690 10.0kb downstream 10.0kb downstream 10000 false chr1: 3500107-3510106 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299089 5265 Fabidae View MSA
124067151 5270 Rosid View MSA
123747323 5271 Pentapetalae View MSA
122786433 5272 Eudicot View MSA
122044817 5273 Angiosperm View MSA
121347406 5274 Embryophyte View MSA
123427925 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.972       Low
cufflinks 3.156        
cufflinks 2.589        
cufflinks 3.88        
cufflinks 2.583        
cufflinks 1.245       Low
cufflinks 4.083       High
cufflinks 3.019        
cufflinks 2.691        

0 Strain