Gene : Medtr1g014260 M. truncatula Mt4.0v1
Defline:  (1 of 3) PF02148//PF13423 - Zn-finger in ubiquitin-hydrolases and other protein (zf-UBP) // Ubiquitin carboxyl-terminal hydrolase (UCH_1) Description:  ubiquitin carboxyl-terminal hydrolase
Genomic Order:  389 Name:  ? Medtr1g014260
Secondary Identifier:  ? PAC:31097737
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g014260 0.5kb upstream 0.5kb upstream 3624 true chr1: 3040717-3044340 Medicago truncatula
Medtr1g014260 0.5kb upstream 0.5kb upstream 500 false chr1: 3040717-3041216 Medicago truncatula
Medtr1g014260 0.5kb downstream 0.5kb downstream 3624 true chr1: 3041217-3044840 Medicago truncatula
Medtr1g014260 0.5kb downstream 0.5kb downstream 500 false chr1: 3044341-3044840 Medicago truncatula
Medtr1g014260 1.0kb upstream 1.0kb upstream 4124 true chr1: 3040217-3044340 Medicago truncatula
Medtr1g014260 1.0kb upstream 1.0kb upstream 1000 false chr1: 3040217-3041216 Medicago truncatula
Medtr1g014260 1.0kb downstream 1.0kb downstream 4124 true chr1: 3041217-3045340 Medicago truncatula
Medtr1g014260 1.0kb downstream 1.0kb downstream 1000 false chr1: 3044341-3045340 Medicago truncatula
Medtr1g014260 2.0kb upstream 2.0kb upstream 5124 true chr1: 3039217-3044340 Medicago truncatula
Medtr1g014260 2.0kb upstream 2.0kb upstream 2000 false chr1: 3039217-3041216 Medicago truncatula
Medtr1g014260 2.0kb downstream 2.0kb downstream 5124 true chr1: 3041217-3046340 Medicago truncatula
Medtr1g014260 2.0kb downstream 2.0kb downstream 2000 false chr1: 3044341-3046340 Medicago truncatula
Medtr1g014260 5.0kb upstream 5.0kb upstream 8124 true chr1: 3036217-3044340 Medicago truncatula
Medtr1g014260 5.0kb upstream 5.0kb upstream 5000 false chr1: 3036217-3041216 Medicago truncatula
Medtr1g014260 5.0kb downstream 5.0kb downstream 8124 true chr1: 3041217-3049340 Medicago truncatula
Medtr1g014260 5.0kb downstream 5.0kb downstream 5000 false chr1: 3044341-3049340 Medicago truncatula
Medtr1g014260 10.0kb upstream 10.0kb upstream 13124 true chr1: 3031217-3044340 Medicago truncatula
Medtr1g014260 10.0kb upstream 10.0kb upstream 10000 false chr1: 3031217-3041216 Medicago truncatula
Medtr1g014260 10.0kb downstream 10.0kb downstream 13124 true chr1: 3041217-3054340 Medicago truncatula
Medtr1g014260 10.0kb downstream 10.0kb downstream 10000 false chr1: 3044341-3054340 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309334 5265 Fabidae View MSA
124070704 5270 Rosid View MSA
123736956 5271 Pentapetalae View MSA
122795648 5272 Eudicot View MSA
122047391 5273 Angiosperm View MSA
121345894 5274 Embryophyte View MSA
123428412 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.774       High
cufflinks 4.828        
cufflinks 6.074        
cufflinks 1.21       Low
cufflinks 4.862        
cufflinks 2.326        
cufflinks 3.713        
cufflinks 4.896        
cufflinks 1.953       Low

0 Strain