Gene : Medtr1g015500 M. truncatula Mt4.0v1
Defline:  (1 of 1) KOG3505 - Mitochondrial/chloroplast ribosomal protein L33-like Description:  50S ribosomal protein L33
Genomic Order:  497 Name:  ? Medtr1g015500
Secondary Identifier:  ? PAC:31098108
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g015500 0.5kb upstream 0.5kb upstream 3469 true chr1: 3886316-3889784 Medicago truncatula
Medtr1g015500 0.5kb upstream 0.5kb upstream 500 false chr1: 3886316-3886815 Medicago truncatula
Medtr1g015500 0.5kb downstream 0.5kb downstream 3469 true chr1: 3886816-3890284 Medicago truncatula
Medtr1g015500 0.5kb downstream 0.5kb downstream 500 false chr1: 3889785-3890284 Medicago truncatula
Medtr1g015500 1.0kb upstream 1.0kb upstream 3969 true chr1: 3885816-3889784 Medicago truncatula
Medtr1g015500 1.0kb upstream 1.0kb upstream 1000 false chr1: 3885816-3886815 Medicago truncatula
Medtr1g015500 1.0kb downstream 1.0kb downstream 3969 true chr1: 3886816-3890784 Medicago truncatula
Medtr1g015500 1.0kb downstream 1.0kb downstream 1000 false chr1: 3889785-3890784 Medicago truncatula
Medtr1g015500 2.0kb upstream 2.0kb upstream 4969 true chr1: 3884816-3889784 Medicago truncatula
Medtr1g015500 2.0kb upstream 2.0kb upstream 2000 false chr1: 3884816-3886815 Medicago truncatula
Medtr1g015500 2.0kb downstream 2.0kb downstream 4969 true chr1: 3886816-3891784 Medicago truncatula
Medtr1g015500 2.0kb downstream 2.0kb downstream 2000 false chr1: 3889785-3891784 Medicago truncatula
Medtr1g015500 5.0kb upstream 5.0kb upstream 7969 true chr1: 3881816-3889784 Medicago truncatula
Medtr1g015500 5.0kb upstream 5.0kb upstream 5000 false chr1: 3881816-3886815 Medicago truncatula
Medtr1g015500 5.0kb downstream 5.0kb downstream 7969 true chr1: 3886816-3894784 Medicago truncatula
Medtr1g015500 5.0kb downstream 5.0kb downstream 5000 false chr1: 3889785-3894784 Medicago truncatula
Medtr1g015500 10.0kb upstream 10.0kb upstream 12969 true chr1: 3876816-3889784 Medicago truncatula
Medtr1g015500 10.0kb upstream 10.0kb upstream 10000 false chr1: 3876816-3886815 Medicago truncatula
Medtr1g015500 10.0kb downstream 10.0kb downstream 12969 true chr1: 3886816-3899784 Medicago truncatula
Medtr1g015500 10.0kb downstream 10.0kb downstream 10000 false chr1: 3889785-3899784 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026232 5273 Angiosperm View MSA
122305368 5265 Fabidae View MSA
124037177 5270 Rosid View MSA
123743240 5271 Pentapetalae View MSA
122789761 5272 Eudicot View MSA
121345561 5274 Embryophyte View MSA
123425406 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.809       Low
cufflinks 2.398        
cufflinks 3.534        
cufflinks 4.782        
cufflinks 4.565        
cufflinks 8.243       High
cufflinks 2.643        
cufflinks 3.206        
cufflinks 4.564        

0 Strain