Gene : Medtr1g016230 M. truncatula Mt4.0v1
Defline:  (1 of 2) 1.4.4.2 - Glycine dehydrogenase (aminomethyl-transferring) / Glycine-cleavage complex P-protein Description:  glycine dehydrogenase [decarboxylating] protein
Genomic Order:  551 Name:  ? Medtr1g016230
Secondary Identifier:  ? PAC:31098525
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula GLYCINE-SYN2-PWY Medicago truncatula pathologic  
Mtruncatula GLYCLEAV-PWY Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g016230 0.5kb upstream 0.5kb upstream 7592 true chr1: 4270388-4277979 Medicago truncatula
Medtr1g016230 0.5kb upstream 0.5kb upstream 500 false chr1: 4270388-4270887 Medicago truncatula
Medtr1g016230 0.5kb downstream 0.5kb downstream 7592 true chr1: 4270888-4278479 Medicago truncatula
Medtr1g016230 0.5kb downstream 0.5kb downstream 500 false chr1: 4277980-4278479 Medicago truncatula
Medtr1g016230 1.0kb upstream 1.0kb upstream 8092 true chr1: 4269888-4277979 Medicago truncatula
Medtr1g016230 1.0kb upstream 1.0kb upstream 1000 false chr1: 4269888-4270887 Medicago truncatula
Medtr1g016230 1.0kb downstream 1.0kb downstream 8092 true chr1: 4270888-4278979 Medicago truncatula
Medtr1g016230 1.0kb downstream 1.0kb downstream 1000 false chr1: 4277980-4278979 Medicago truncatula
Medtr1g016230 2.0kb upstream 2.0kb upstream 9092 true chr1: 4268888-4277979 Medicago truncatula
Medtr1g016230 2.0kb upstream 2.0kb upstream 2000 false chr1: 4268888-4270887 Medicago truncatula
Medtr1g016230 2.0kb downstream 2.0kb downstream 9092 true chr1: 4270888-4279979 Medicago truncatula
Medtr1g016230 2.0kb downstream 2.0kb downstream 2000 false chr1: 4277980-4279979 Medicago truncatula
Medtr1g016230 5.0kb upstream 5.0kb upstream 12092 true chr1: 4265888-4277979 Medicago truncatula
Medtr1g016230 5.0kb upstream 5.0kb upstream 5000 false chr1: 4265888-4270887 Medicago truncatula
Medtr1g016230 5.0kb downstream 5.0kb downstream 12092 true chr1: 4270888-4282979 Medicago truncatula
Medtr1g016230 5.0kb downstream 5.0kb downstream 5000 false chr1: 4277980-4282979 Medicago truncatula
Medtr1g016230 10.0kb upstream 10.0kb upstream 17092 true chr1: 4260888-4277979 Medicago truncatula
Medtr1g016230 10.0kb upstream 10.0kb upstream 10000 false chr1: 4260888-4270887 Medicago truncatula
Medtr1g016230 10.0kb downstream 10.0kb downstream 17092 true chr1: 4270888-4287979 Medicago truncatula
Medtr1g016230 10.0kb downstream 10.0kb downstream 10000 false chr1: 4277980-4287979 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304426 5265 Fabidae View MSA
124061980 5270 Rosid View MSA
123750406 5271 Pentapetalae View MSA
122792925 5272 Eudicot View MSA
122042189 5273 Angiosperm View MSA
121346378 5274 Embryophyte View MSA
123424003 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.993     High  
cufflinks 226.273     High High
cufflinks 151.295     High  
cufflinks 6.142       Low
cufflinks 227.636     High High
cufflinks 2.607       Low
cufflinks 14.543     High  
cufflinks 166.778     High  
cufflinks 23.691     High  

0 Strain