Gene : Medtr1g016910 M. truncatula Mt4.0v1
Defline:  (1 of 34) PF03080//PF14365 - Domain of unknown function (DUF239) (DUF239) // Domain of unknown function (DUF4409) (DUF4409) Description:  carboxyl-terminal peptidase
Genomic Order:  595 Name:  ? Medtr1g016910
Secondary Identifier:  ? PAC:31093596
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g016910 0.5kb upstream 0.5kb upstream 3099 true chr1: 4553763-4556861 Medicago truncatula
Medtr1g016910 0.5kb upstream 0.5kb upstream 500 false chr1: 4553763-4554262 Medicago truncatula
Medtr1g016910 0.5kb downstream 0.5kb downstream 3099 true chr1: 4554263-4557361 Medicago truncatula
Medtr1g016910 0.5kb downstream 0.5kb downstream 500 false chr1: 4556862-4557361 Medicago truncatula
Medtr1g016910 1.0kb upstream 1.0kb upstream 3599 true chr1: 4553263-4556861 Medicago truncatula
Medtr1g016910 1.0kb upstream 1.0kb upstream 1000 false chr1: 4553263-4554262 Medicago truncatula
Medtr1g016910 1.0kb downstream 1.0kb downstream 3599 true chr1: 4554263-4557861 Medicago truncatula
Medtr1g016910 1.0kb downstream 1.0kb downstream 1000 false chr1: 4556862-4557861 Medicago truncatula
Medtr1g016910 2.0kb upstream 2.0kb upstream 4599 true chr1: 4552263-4556861 Medicago truncatula
Medtr1g016910 2.0kb upstream 2.0kb upstream 2000 false chr1: 4552263-4554262 Medicago truncatula
Medtr1g016910 2.0kb downstream 2.0kb downstream 4599 true chr1: 4554263-4558861 Medicago truncatula
Medtr1g016910 2.0kb downstream 2.0kb downstream 2000 false chr1: 4556862-4558861 Medicago truncatula
Medtr1g016910 5.0kb upstream 5.0kb upstream 7599 true chr1: 4549263-4556861 Medicago truncatula
Medtr1g016910 5.0kb upstream 5.0kb upstream 5000 false chr1: 4549263-4554262 Medicago truncatula
Medtr1g016910 5.0kb downstream 5.0kb downstream 7599 true chr1: 4554263-4561861 Medicago truncatula
Medtr1g016910 5.0kb downstream 5.0kb downstream 5000 false chr1: 4556862-4561861 Medicago truncatula
Medtr1g016910 10.0kb upstream 10.0kb upstream 12599 true chr1: 4544263-4556861 Medicago truncatula
Medtr1g016910 10.0kb upstream 10.0kb upstream 10000 false chr1: 4544263-4554262 Medicago truncatula
Medtr1g016910 10.0kb downstream 10.0kb downstream 12599 true chr1: 4554263-4566861 Medicago truncatula
Medtr1g016910 10.0kb downstream 10.0kb downstream 10000 false chr1: 4556862-4566861 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304762 5265 Fabidae View MSA
124074283 5270 Rosid View MSA
123753303 5271 Pentapetalae View MSA
122796959 5272 Eudicot View MSA
122051639 5273 Angiosperm View MSA
121347802 5274 Embryophyte View MSA
123380632 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.009     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain