Gene : Medtr1g016800 M. truncatula Mt4.0v1
Defline:  (1 of 12) PF07797 - Protein of unknown function (DUF1639) (DUF1639) Description:  DUF1639 family protein
Genomic Order:  586 Name:  ? Medtr1g016800
Secondary Identifier:  ? PAC:31096785
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g016800 0.5kb upstream 0.5kb upstream 6887 true chr1: 4501653-4508539 Medicago truncatula
Medtr1g016800 0.5kb upstream 0.5kb upstream 500 false chr1: 4501653-4502152 Medicago truncatula
Medtr1g016800 0.5kb downstream 0.5kb downstream 6887 true chr1: 4502153-4509039 Medicago truncatula
Medtr1g016800 0.5kb downstream 0.5kb downstream 500 false chr1: 4508540-4509039 Medicago truncatula
Medtr1g016800 1.0kb upstream 1.0kb upstream 7387 true chr1: 4501153-4508539 Medicago truncatula
Medtr1g016800 1.0kb upstream 1.0kb upstream 1000 false chr1: 4501153-4502152 Medicago truncatula
Medtr1g016800 1.0kb downstream 1.0kb downstream 7387 true chr1: 4502153-4509539 Medicago truncatula
Medtr1g016800 1.0kb downstream 1.0kb downstream 1000 false chr1: 4508540-4509539 Medicago truncatula
Medtr1g016800 2.0kb upstream 2.0kb upstream 8387 true chr1: 4500153-4508539 Medicago truncatula
Medtr1g016800 2.0kb upstream 2.0kb upstream 2000 false chr1: 4500153-4502152 Medicago truncatula
Medtr1g016800 2.0kb downstream 2.0kb downstream 8387 true chr1: 4502153-4510539 Medicago truncatula
Medtr1g016800 2.0kb downstream 2.0kb downstream 2000 false chr1: 4508540-4510539 Medicago truncatula
Medtr1g016800 5.0kb upstream 5.0kb upstream 11387 true chr1: 4497153-4508539 Medicago truncatula
Medtr1g016800 5.0kb upstream 5.0kb upstream 5000 false chr1: 4497153-4502152 Medicago truncatula
Medtr1g016800 5.0kb downstream 5.0kb downstream 11387 true chr1: 4502153-4513539 Medicago truncatula
Medtr1g016800 5.0kb downstream 5.0kb downstream 5000 false chr1: 4508540-4513539 Medicago truncatula
Medtr1g016800 10.0kb upstream 10.0kb upstream 16387 true chr1: 4492153-4508539 Medicago truncatula
Medtr1g016800 10.0kb upstream 10.0kb upstream 10000 false chr1: 4492153-4502152 Medicago truncatula
Medtr1g016800 10.0kb downstream 10.0kb downstream 16387 true chr1: 4502153-4518539 Medicago truncatula
Medtr1g016800 10.0kb downstream 10.0kb downstream 10000 false chr1: 4508540-4518539 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299538 5265 Fabidae View MSA
124068290 5270 Rosid View MSA
123746076 5271 Pentapetalae View MSA
122796883 5272 Eudicot View MSA
122049023 5273 Angiosperm View MSA
121351496 5274 Embryophyte View MSA
123382191 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.29        
cufflinks 9.499     High  
cufflinks 9.142        
cufflinks 2.363       Low
cufflinks 7.631        
cufflinks 3.832       Low
cufflinks 8.232        
cufflinks 8.225        
cufflinks 4.721        

0 Strain