Gene : Medtr1g051820 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR10317 - EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT E Description:  eukaryotic translation initiation factor 3E
Genomic Order:  2656 Name:  ? Medtr1g051820
Secondary Identifier:  ? PAC:31092751
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g051820 0.5kb upstream 0.5kb upstream 4290 true chr1: 20717970-20722259 Medicago truncatula
Medtr1g051820 0.5kb upstream 0.5kb upstream 500 false chr1: 20721760-20722259 Medicago truncatula
Medtr1g051820 0.5kb downstream 0.5kb downstream 4290 true chr1: 20717470-20721759 Medicago truncatula
Medtr1g051820 0.5kb downstream 0.5kb downstream 500 false chr1: 20717470-20717969 Medicago truncatula
Medtr1g051820 1.0kb upstream 1.0kb upstream 4790 true chr1: 20717970-20722759 Medicago truncatula
Medtr1g051820 1.0kb upstream 1.0kb upstream 1000 false chr1: 20721760-20722759 Medicago truncatula
Medtr1g051820 1.0kb downstream 1.0kb downstream 4790 true chr1: 20716970-20721759 Medicago truncatula
Medtr1g051820 1.0kb downstream 1.0kb downstream 1000 false chr1: 20716970-20717969 Medicago truncatula
Medtr1g051820 2.0kb upstream 2.0kb upstream 5790 true chr1: 20717970-20723759 Medicago truncatula
Medtr1g051820 2.0kb upstream 2.0kb upstream 2000 false chr1: 20721760-20723759 Medicago truncatula
Medtr1g051820 2.0kb downstream 2.0kb downstream 5790 true chr1: 20715970-20721759 Medicago truncatula
Medtr1g051820 2.0kb downstream 2.0kb downstream 2000 false chr1: 20715970-20717969 Medicago truncatula
Medtr1g051820 5.0kb upstream 5.0kb upstream 8790 true chr1: 20717970-20726759 Medicago truncatula
Medtr1g051820 5.0kb upstream 5.0kb upstream 5000 false chr1: 20721760-20726759 Medicago truncatula
Medtr1g051820 5.0kb downstream 5.0kb downstream 8790 true chr1: 20712970-20721759 Medicago truncatula
Medtr1g051820 5.0kb downstream 5.0kb downstream 5000 false chr1: 20712970-20717969 Medicago truncatula
Medtr1g051820 10.0kb upstream 10.0kb upstream 13790 true chr1: 20717970-20731759 Medicago truncatula
Medtr1g051820 10.0kb upstream 10.0kb upstream 10000 false chr1: 20721760-20731759 Medicago truncatula
Medtr1g051820 10.0kb downstream 10.0kb downstream 13790 true chr1: 20707970-20721759 Medicago truncatula
Medtr1g051820 10.0kb downstream 10.0kb downstream 10000 false chr1: 20707970-20717969 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305964 5265 Fabidae View MSA
124067945 5270 Rosid View MSA
123749656 5271 Pentapetalae View MSA
122787215 5272 Eudicot View MSA
122046060 5273 Angiosperm View MSA
121347595 5274 Embryophyte View MSA
123424359 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.699        
cufflinks 11.871     High  
cufflinks 14.642     High  
cufflinks 7.364        
cufflinks 18.01     High  
cufflinks 3.408       Low
cufflinks 13.179     High  
cufflinks 15.3     High  
cufflinks 14.41     High  

0 Strain