Gene : Medtr1g052535 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR23115:SF165 - TYPA-LIKE TRANSLATION ELONGATION FACTOR SVR3-RELATED Description:  GTP-binding protein TypA/BipA
Genomic Order:  2716 Name:  ? Medtr1g052535
Secondary Identifier:  ? PAC:31092927
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g052535 0.5kb upstream 0.5kb upstream 8751 true chr1: 21392688-21401438 Medicago truncatula
Medtr1g052535 0.5kb upstream 0.5kb upstream 500 false chr1: 21400939-21401438 Medicago truncatula
Medtr1g052535 0.5kb downstream 0.5kb downstream 8751 true chr1: 21392188-21400938 Medicago truncatula
Medtr1g052535 0.5kb downstream 0.5kb downstream 500 false chr1: 21392188-21392687 Medicago truncatula
Medtr1g052535 1.0kb upstream 1.0kb upstream 9251 true chr1: 21392688-21401938 Medicago truncatula
Medtr1g052535 1.0kb upstream 1.0kb upstream 1000 false chr1: 21400939-21401938 Medicago truncatula
Medtr1g052535 1.0kb downstream 1.0kb downstream 9251 true chr1: 21391688-21400938 Medicago truncatula
Medtr1g052535 1.0kb downstream 1.0kb downstream 1000 false chr1: 21391688-21392687 Medicago truncatula
Medtr1g052535 2.0kb upstream 2.0kb upstream 10251 true chr1: 21392688-21402938 Medicago truncatula
Medtr1g052535 2.0kb upstream 2.0kb upstream 2000 false chr1: 21400939-21402938 Medicago truncatula
Medtr1g052535 2.0kb downstream 2.0kb downstream 10251 true chr1: 21390688-21400938 Medicago truncatula
Medtr1g052535 2.0kb downstream 2.0kb downstream 2000 false chr1: 21390688-21392687 Medicago truncatula
Medtr1g052535 5.0kb upstream 5.0kb upstream 13251 true chr1: 21392688-21405938 Medicago truncatula
Medtr1g052535 5.0kb upstream 5.0kb upstream 5000 false chr1: 21400939-21405938 Medicago truncatula
Medtr1g052535 5.0kb downstream 5.0kb downstream 13251 true chr1: 21387688-21400938 Medicago truncatula
Medtr1g052535 5.0kb downstream 5.0kb downstream 5000 false chr1: 21387688-21392687 Medicago truncatula
Medtr1g052535 10.0kb upstream 10.0kb upstream 18251 true chr1: 21392688-21410938 Medicago truncatula
Medtr1g052535 10.0kb upstream 10.0kb upstream 10000 false chr1: 21400939-21410938 Medicago truncatula
Medtr1g052535 10.0kb downstream 10.0kb downstream 18251 true chr1: 21382688-21400938 Medicago truncatula
Medtr1g052535 10.0kb downstream 10.0kb downstream 10000 false chr1: 21382688-21392687 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300020 5265 Fabidae View MSA
124067913 5270 Rosid View MSA
123740799 5271 Pentapetalae View MSA
122792956 5272 Eudicot View MSA
122047839 5273 Angiosperm View MSA
121347547 5274 Embryophyte View MSA
123425076 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.997        
cufflinks 66.859     High High
cufflinks 39.512     High  
cufflinks 3.925        
cufflinks 65.43     High High
cufflinks 2.776        
cufflinks 3.427        
cufflinks 57.861     High High
cufflinks 2.346       Low

0 Strain