Gene : Medtr1g053160 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR22912:SF48 - NADPH-DEPENDENT THIOREDOXIN REDUCTASE 3 Description:  NADPH-dependent thioredoxin reductase
Genomic Order:  2780 Name:  ? Medtr1g053160
Secondary Identifier:  ? PAC:31096994
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula THIOREDOX-PWY Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g053160 0.5kb upstream 0.5kb upstream 8595 true chr1: 22174189-22182783 Medicago truncatula
Medtr1g053160 0.5kb upstream 0.5kb upstream 500 false chr1: 22182284-22182783 Medicago truncatula
Medtr1g053160 0.5kb downstream 0.5kb downstream 8595 true chr1: 22173689-22182283 Medicago truncatula
Medtr1g053160 0.5kb downstream 0.5kb downstream 500 false chr1: 22173689-22174188 Medicago truncatula
Medtr1g053160 1.0kb upstream 1.0kb upstream 9095 true chr1: 22174189-22183283 Medicago truncatula
Medtr1g053160 1.0kb upstream 1.0kb upstream 1000 false chr1: 22182284-22183283 Medicago truncatula
Medtr1g053160 1.0kb downstream 1.0kb downstream 9095 true chr1: 22173189-22182283 Medicago truncatula
Medtr1g053160 1.0kb downstream 1.0kb downstream 1000 false chr1: 22173189-22174188 Medicago truncatula
Medtr1g053160 2.0kb upstream 2.0kb upstream 10095 true chr1: 22174189-22184283 Medicago truncatula
Medtr1g053160 2.0kb upstream 2.0kb upstream 2000 false chr1: 22182284-22184283 Medicago truncatula
Medtr1g053160 2.0kb downstream 2.0kb downstream 10095 true chr1: 22172189-22182283 Medicago truncatula
Medtr1g053160 2.0kb downstream 2.0kb downstream 2000 false chr1: 22172189-22174188 Medicago truncatula
Medtr1g053160 5.0kb upstream 5.0kb upstream 13095 true chr1: 22174189-22187283 Medicago truncatula
Medtr1g053160 5.0kb upstream 5.0kb upstream 5000 false chr1: 22182284-22187283 Medicago truncatula
Medtr1g053160 5.0kb downstream 5.0kb downstream 13095 true chr1: 22169189-22182283 Medicago truncatula
Medtr1g053160 5.0kb downstream 5.0kb downstream 5000 false chr1: 22169189-22174188 Medicago truncatula
Medtr1g053160 10.0kb upstream 10.0kb upstream 18095 true chr1: 22174189-22192283 Medicago truncatula
Medtr1g053160 10.0kb upstream 10.0kb upstream 10000 false chr1: 22182284-22192283 Medicago truncatula
Medtr1g053160 10.0kb downstream 10.0kb downstream 18095 true chr1: 22164189-22182283 Medicago truncatula
Medtr1g053160 10.0kb downstream 10.0kb downstream 10000 false chr1: 22164189-22174188 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301359 5265 Fabidae View MSA
124063608 5270 Rosid View MSA
123745502 5271 Pentapetalae View MSA
122789428 5272 Eudicot View MSA
122046832 5273 Angiosperm View MSA
121345870 5274 Embryophyte View MSA
123426423 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.529        
cufflinks 20.028     High High
cufflinks 8.189        
cufflinks 0.275        
cufflinks 20.573     High High
cufflinks 0.103     Low Low
cufflinks 0.495        
cufflinks 16.002     High High
cufflinks 0.545        

0 Strain