Gene : Medtr1g053130 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR31696:SF14 - PROTEIN MIZU-KUSSEI 1 Description:  DUF617 family protein
Genomic Order:  2778 Name:  ? Medtr1g053130
Secondary Identifier:  ? PAC:31094946
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g053130 0.5kb upstream 0.5kb upstream 1936 true chr1: 22154745-22156680 Medicago truncatula
Medtr1g053130 0.5kb upstream 0.5kb upstream 500 false chr1: 22154745-22155244 Medicago truncatula
Medtr1g053130 0.5kb downstream 0.5kb downstream 1936 true chr1: 22155245-22157180 Medicago truncatula
Medtr1g053130 0.5kb downstream 0.5kb downstream 500 false chr1: 22156681-22157180 Medicago truncatula
Medtr1g053130 1.0kb upstream 1.0kb upstream 2436 true chr1: 22154245-22156680 Medicago truncatula
Medtr1g053130 1.0kb upstream 1.0kb upstream 1000 false chr1: 22154245-22155244 Medicago truncatula
Medtr1g053130 1.0kb downstream 1.0kb downstream 2436 true chr1: 22155245-22157680 Medicago truncatula
Medtr1g053130 1.0kb downstream 1.0kb downstream 1000 false chr1: 22156681-22157680 Medicago truncatula
Medtr1g053130 2.0kb upstream 2.0kb upstream 3436 true chr1: 22153245-22156680 Medicago truncatula
Medtr1g053130 2.0kb upstream 2.0kb upstream 2000 false chr1: 22153245-22155244 Medicago truncatula
Medtr1g053130 2.0kb downstream 2.0kb downstream 3436 true chr1: 22155245-22158680 Medicago truncatula
Medtr1g053130 2.0kb downstream 2.0kb downstream 2000 false chr1: 22156681-22158680 Medicago truncatula
Medtr1g053130 5.0kb upstream 5.0kb upstream 6436 true chr1: 22150245-22156680 Medicago truncatula
Medtr1g053130 5.0kb upstream 5.0kb upstream 5000 false chr1: 22150245-22155244 Medicago truncatula
Medtr1g053130 5.0kb downstream 5.0kb downstream 6436 true chr1: 22155245-22161680 Medicago truncatula
Medtr1g053130 5.0kb downstream 5.0kb downstream 5000 false chr1: 22156681-22161680 Medicago truncatula
Medtr1g053130 10.0kb upstream 10.0kb upstream 11436 true chr1: 22145245-22156680 Medicago truncatula
Medtr1g053130 10.0kb upstream 10.0kb upstream 10000 false chr1: 22145245-22155244 Medicago truncatula
Medtr1g053130 10.0kb downstream 10.0kb downstream 11436 true chr1: 22155245-22166680 Medicago truncatula
Medtr1g053130 10.0kb downstream 10.0kb downstream 10000 false chr1: 22156681-22166680 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304032 5265 Fabidae View MSA
124068975 5270 Rosid View MSA
123753041 5271 Pentapetalae View MSA
122795170 5272 Eudicot View MSA
122050120 5273 Angiosperm View MSA
121349765 5274 Embryophyte View MSA
123381434 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.221        
cufflinks 0.24        
cufflinks 0.321        
cufflinks 5.555       High
cufflinks 0.452        
cufflinks 3.102        
cufflinks 1.369        
cufflinks 0.131       Low
cufflinks 6.094       High

0 Strain