Gene : Medtr1g052135 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR32060:SF5 - PEPTIDASE S41 FAMILY PROTEIN Description:  carboxy-terminal processing peptidase-like protein
Genomic Order:  2677 Name:  ? Medtr1g052135
Secondary Identifier:  ? PAC:31094614
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g052135 0.5kb upstream 0.5kb upstream 5836 true chr1: 21011208-21017043 Medicago truncatula
Medtr1g052135 0.5kb upstream 0.5kb upstream 500 false chr1: 21016544-21017043 Medicago truncatula
Medtr1g052135 0.5kb downstream 0.5kb downstream 5836 true chr1: 21010708-21016543 Medicago truncatula
Medtr1g052135 0.5kb downstream 0.5kb downstream 500 false chr1: 21010708-21011207 Medicago truncatula
Medtr1g052135 1.0kb upstream 1.0kb upstream 6336 true chr1: 21011208-21017543 Medicago truncatula
Medtr1g052135 1.0kb upstream 1.0kb upstream 1000 false chr1: 21016544-21017543 Medicago truncatula
Medtr1g052135 1.0kb downstream 1.0kb downstream 6336 true chr1: 21010208-21016543 Medicago truncatula
Medtr1g052135 1.0kb downstream 1.0kb downstream 1000 false chr1: 21010208-21011207 Medicago truncatula
Medtr1g052135 2.0kb upstream 2.0kb upstream 7336 true chr1: 21011208-21018543 Medicago truncatula
Medtr1g052135 2.0kb upstream 2.0kb upstream 2000 false chr1: 21016544-21018543 Medicago truncatula
Medtr1g052135 2.0kb downstream 2.0kb downstream 7336 true chr1: 21009208-21016543 Medicago truncatula
Medtr1g052135 2.0kb downstream 2.0kb downstream 2000 false chr1: 21009208-21011207 Medicago truncatula
Medtr1g052135 5.0kb upstream 5.0kb upstream 10336 true chr1: 21011208-21021543 Medicago truncatula
Medtr1g052135 5.0kb upstream 5.0kb upstream 5000 false chr1: 21016544-21021543 Medicago truncatula
Medtr1g052135 5.0kb downstream 5.0kb downstream 10336 true chr1: 21006208-21016543 Medicago truncatula
Medtr1g052135 5.0kb downstream 5.0kb downstream 5000 false chr1: 21006208-21011207 Medicago truncatula
Medtr1g052135 10.0kb upstream 10.0kb upstream 15336 true chr1: 21011208-21026543 Medicago truncatula
Medtr1g052135 10.0kb upstream 10.0kb upstream 10000 false chr1: 21016544-21026543 Medicago truncatula
Medtr1g052135 10.0kb downstream 10.0kb downstream 15336 true chr1: 21001208-21016543 Medicago truncatula
Medtr1g052135 10.0kb downstream 10.0kb downstream 10000 false chr1: 21001208-21011207 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307614 5265 Fabidae View MSA
124067305 5270 Rosid View MSA
123750616 5271 Pentapetalae View MSA
122792134 5272 Eudicot View MSA
122042962 5273 Angiosperm View MSA
121346288 5274 Embryophyte View MSA
123424698 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.004     Low  
cufflinks 2.172        
cufflinks 3.896        
cufflinks 0.001     Low Low
cufflinks 2.885        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.001     Low Low
cufflinks 3.217        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain