Gene : Medtr1g052730 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11062//PTHR11062:SF21 - EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED Description:  exostosin family protein
Genomic Order:  2736 Name:  ? Medtr1g052730
Secondary Identifier:  ? PAC:31096172
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-5980 Medicago truncatula pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g052730 0.5kb upstream 0.5kb upstream 7723 true chr1: 21687416-21695138 Medicago truncatula
Medtr1g052730 0.5kb upstream 0.5kb upstream 500 false chr1: 21687416-21687915 Medicago truncatula
Medtr1g052730 0.5kb downstream 0.5kb downstream 7723 true chr1: 21687916-21695638 Medicago truncatula
Medtr1g052730 0.5kb downstream 0.5kb downstream 500 false chr1: 21695139-21695638 Medicago truncatula
Medtr1g052730 1.0kb upstream 1.0kb upstream 8223 true chr1: 21686916-21695138 Medicago truncatula
Medtr1g052730 1.0kb upstream 1.0kb upstream 1000 false chr1: 21686916-21687915 Medicago truncatula
Medtr1g052730 1.0kb downstream 1.0kb downstream 8223 true chr1: 21687916-21696138 Medicago truncatula
Medtr1g052730 1.0kb downstream 1.0kb downstream 1000 false chr1: 21695139-21696138 Medicago truncatula
Medtr1g052730 2.0kb upstream 2.0kb upstream 9223 true chr1: 21685916-21695138 Medicago truncatula
Medtr1g052730 2.0kb upstream 2.0kb upstream 2000 false chr1: 21685916-21687915 Medicago truncatula
Medtr1g052730 2.0kb downstream 2.0kb downstream 9223 true chr1: 21687916-21697138 Medicago truncatula
Medtr1g052730 2.0kb downstream 2.0kb downstream 2000 false chr1: 21695139-21697138 Medicago truncatula
Medtr1g052730 5.0kb upstream 5.0kb upstream 12223 true chr1: 21682916-21695138 Medicago truncatula
Medtr1g052730 5.0kb upstream 5.0kb upstream 5000 false chr1: 21682916-21687915 Medicago truncatula
Medtr1g052730 5.0kb downstream 5.0kb downstream 12223 true chr1: 21687916-21700138 Medicago truncatula
Medtr1g052730 5.0kb downstream 5.0kb downstream 5000 false chr1: 21695139-21700138 Medicago truncatula
Medtr1g052730 10.0kb upstream 10.0kb upstream 17223 true chr1: 21677916-21695138 Medicago truncatula
Medtr1g052730 10.0kb upstream 10.0kb upstream 10000 false chr1: 21677916-21687915 Medicago truncatula
Medtr1g052730 10.0kb downstream 10.0kb downstream 17223 true chr1: 21687916-21705138 Medicago truncatula
Medtr1g052730 10.0kb downstream 10.0kb downstream 10000 false chr1: 21695139-21705138 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301362 5265 Fabidae View MSA
124062411 5270 Rosid View MSA
123741166 5271 Pentapetalae View MSA
122787987 5272 Eudicot View MSA
122046207 5273 Angiosperm View MSA
121347306 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.858        
cufflinks 1.597        
cufflinks 1.79        
cufflinks 0.495        
cufflinks 2.9       High
cufflinks 0.319       Low
cufflinks 0.893        
cufflinks 1.43        
cufflinks 0.568        

0 Strain