Gene : Medtr1g007380 M. truncatula Mt4.0v1
Defline:  (1 of 6) PTHR22950:SF278 - AMINO ACID PERMEASE 1-RELATED Description:  transmembrane amino acid transporter family protein
Genomic Order:  56 Name:  ? Medtr1g007380
Secondary Identifier:  ? PAC:31097035
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g007380 0.5kb upstream 0.5kb upstream 4635 true chr1: 311854-316488 Medicago truncatula
Medtr1g007380 0.5kb upstream 0.5kb upstream 500 false chr1: 315989-316488 Medicago truncatula
Medtr1g007380 0.5kb downstream 0.5kb downstream 4635 true chr1: 311354-315988 Medicago truncatula
Medtr1g007380 0.5kb downstream 0.5kb downstream 500 false chr1: 311354-311853 Medicago truncatula
Medtr1g007380 1.0kb upstream 1.0kb upstream 5135 true chr1: 311854-316988 Medicago truncatula
Medtr1g007380 1.0kb upstream 1.0kb upstream 1000 false chr1: 315989-316988 Medicago truncatula
Medtr1g007380 1.0kb downstream 1.0kb downstream 5135 true chr1: 310854-315988 Medicago truncatula
Medtr1g007380 1.0kb downstream 1.0kb downstream 1000 false chr1: 310854-311853 Medicago truncatula
Medtr1g007380 2.0kb upstream 2.0kb upstream 6135 true chr1: 311854-317988 Medicago truncatula
Medtr1g007380 2.0kb upstream 2.0kb upstream 2000 false chr1: 315989-317988 Medicago truncatula
Medtr1g007380 2.0kb downstream 2.0kb downstream 6135 true chr1: 309854-315988 Medicago truncatula
Medtr1g007380 2.0kb downstream 2.0kb downstream 2000 false chr1: 309854-311853 Medicago truncatula
Medtr1g007380 5.0kb upstream 5.0kb upstream 9135 true chr1: 311854-320988 Medicago truncatula
Medtr1g007380 5.0kb upstream 5.0kb upstream 5000 false chr1: 315989-320988 Medicago truncatula
Medtr1g007380 5.0kb downstream 5.0kb downstream 9135 true chr1: 306854-315988 Medicago truncatula
Medtr1g007380 5.0kb downstream 5.0kb downstream 5000 false chr1: 306854-311853 Medicago truncatula
Medtr1g007380 10.0kb upstream 10.0kb upstream 14135 true chr1: 311854-325988 Medicago truncatula
Medtr1g007380 10.0kb upstream 10.0kb upstream 10000 false chr1: 315989-325988 Medicago truncatula
Medtr1g007380 10.0kb downstream 10.0kb downstream 14135 true chr1: 301854-315988 Medicago truncatula
Medtr1g007380 10.0kb downstream 10.0kb downstream 10000 false chr1: 301854-311853 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122287814 5265 Fabidae View MSA
124060792 5270 Rosid View MSA
123749377 5271 Pentapetalae View MSA
122789981 5272 Eudicot View MSA
122044939 5273 Angiosperm View MSA
121310365 5274 Embryophyte View MSA
123347867 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.374     High  
cufflinks 77.834     High High
cufflinks 36.151     High  
cufflinks 10.959     High  
cufflinks 25.182     High  
cufflinks 6.074       Low
cufflinks 19.624     High  
cufflinks 38.329     High  
cufflinks 18.219     High  

0 Strain