Gene : Medtr1g007180 M. truncatula Mt4.0v1
Defline:  (1 of 7) PTHR22950//PTHR22950:SF208 - AMINO ACID TRANSPORTER Description:  transmembrane amino acid transporter family protein
Genomic Order:  36 Name:  ? Medtr1g007180
Secondary Identifier:  ? PAC:31098881
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g007180 0.5kb upstream 0.5kb upstream 4623 true chr1: 220850-225472 Medicago truncatula
Medtr1g007180 0.5kb upstream 0.5kb upstream 500 false chr1: 224973-225472 Medicago truncatula
Medtr1g007180 0.5kb downstream 0.5kb downstream 4623 true chr1: 220350-224972 Medicago truncatula
Medtr1g007180 0.5kb downstream 0.5kb downstream 500 false chr1: 220350-220849 Medicago truncatula
Medtr1g007180 1.0kb upstream 1.0kb upstream 5123 true chr1: 220850-225972 Medicago truncatula
Medtr1g007180 1.0kb upstream 1.0kb upstream 1000 false chr1: 224973-225972 Medicago truncatula
Medtr1g007180 1.0kb downstream 1.0kb downstream 5123 true chr1: 219850-224972 Medicago truncatula
Medtr1g007180 1.0kb downstream 1.0kb downstream 1000 false chr1: 219850-220849 Medicago truncatula
Medtr1g007180 2.0kb upstream 2.0kb upstream 6123 true chr1: 220850-226972 Medicago truncatula
Medtr1g007180 2.0kb upstream 2.0kb upstream 2000 false chr1: 224973-226972 Medicago truncatula
Medtr1g007180 2.0kb downstream 2.0kb downstream 6123 true chr1: 218850-224972 Medicago truncatula
Medtr1g007180 2.0kb downstream 2.0kb downstream 2000 false chr1: 218850-220849 Medicago truncatula
Medtr1g007180 5.0kb upstream 5.0kb upstream 9123 true chr1: 220850-229972 Medicago truncatula
Medtr1g007180 5.0kb upstream 5.0kb upstream 5000 false chr1: 224973-229972 Medicago truncatula
Medtr1g007180 5.0kb downstream 5.0kb downstream 9123 true chr1: 215850-224972 Medicago truncatula
Medtr1g007180 5.0kb downstream 5.0kb downstream 5000 false chr1: 215850-220849 Medicago truncatula
Medtr1g007180 10.0kb upstream 10.0kb upstream 14123 true chr1: 220850-234972 Medicago truncatula
Medtr1g007180 10.0kb upstream 10.0kb upstream 10000 false chr1: 224973-234972 Medicago truncatula
Medtr1g007180 10.0kb downstream 10.0kb downstream 14123 true chr1: 210850-224972 Medicago truncatula
Medtr1g007180 10.0kb downstream 10.0kb downstream 10000 false chr1: 210850-220849 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122316239 5265 Fabidae View MSA
124074957 5270 Rosid View MSA
123749377 5271 Pentapetalae View MSA
122789981 5272 Eudicot View MSA
122044939 5273 Angiosperm View MSA
121310365 5274 Embryophyte View MSA
123347867 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.135        
cufflinks 46.999     High High
cufflinks 33.682     High  
cufflinks 2.381       Low
cufflinks 28.187     High  
cufflinks 3.128        
cufflinks 5.905        
cufflinks 44.33     High High
cufflinks 3.613        

0 Strain