Gene : Medtr1g053255 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR21576:SF19 - ARM REPEAT SUPERFAMILY PROTEIN Description:  RRP12-like protein
Genomic Order:  2784 Name:  ? Medtr1g053255
Secondary Identifier:  ? PAC:31095115
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g053255 0.5kb upstream 0.5kb upstream 14151 true chr1: 22315101-22329251 Medicago truncatula
Medtr1g053255 0.5kb upstream 0.5kb upstream 500 false chr1: 22315101-22315600 Medicago truncatula
Medtr1g053255 0.5kb downstream 0.5kb downstream 14151 true chr1: 22315601-22329751 Medicago truncatula
Medtr1g053255 0.5kb downstream 0.5kb downstream 500 false chr1: 22329252-22329751 Medicago truncatula
Medtr1g053255 1.0kb upstream 1.0kb upstream 14651 true chr1: 22314601-22329251 Medicago truncatula
Medtr1g053255 1.0kb upstream 1.0kb upstream 1000 false chr1: 22314601-22315600 Medicago truncatula
Medtr1g053255 1.0kb downstream 1.0kb downstream 14651 true chr1: 22315601-22330251 Medicago truncatula
Medtr1g053255 1.0kb downstream 1.0kb downstream 1000 false chr1: 22329252-22330251 Medicago truncatula
Medtr1g053255 2.0kb upstream 2.0kb upstream 15651 true chr1: 22313601-22329251 Medicago truncatula
Medtr1g053255 2.0kb upstream 2.0kb upstream 2000 false chr1: 22313601-22315600 Medicago truncatula
Medtr1g053255 2.0kb downstream 2.0kb downstream 15651 true chr1: 22315601-22331251 Medicago truncatula
Medtr1g053255 2.0kb downstream 2.0kb downstream 2000 false chr1: 22329252-22331251 Medicago truncatula
Medtr1g053255 5.0kb upstream 5.0kb upstream 18651 true chr1: 22310601-22329251 Medicago truncatula
Medtr1g053255 5.0kb upstream 5.0kb upstream 5000 false chr1: 22310601-22315600 Medicago truncatula
Medtr1g053255 5.0kb downstream 5.0kb downstream 18651 true chr1: 22315601-22334251 Medicago truncatula
Medtr1g053255 5.0kb downstream 5.0kb downstream 5000 false chr1: 22329252-22334251 Medicago truncatula
Medtr1g053255 10.0kb upstream 10.0kb upstream 23651 true chr1: 22305601-22329251 Medicago truncatula
Medtr1g053255 10.0kb upstream 10.0kb upstream 10000 false chr1: 22305601-22315600 Medicago truncatula
Medtr1g053255 10.0kb downstream 10.0kb downstream 23651 true chr1: 22315601-22339251 Medicago truncatula
Medtr1g053255 10.0kb downstream 10.0kb downstream 10000 false chr1: 22329252-22339251 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299222 5265 Fabidae View MSA
124064000 5270 Rosid View MSA
123738418 5271 Pentapetalae View MSA
122786075 5272 Eudicot View MSA
122044020 5273 Angiosperm View MSA
121310227 5274 Embryophyte View MSA
123347775 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.417        
cufflinks 2.134        
cufflinks 2.538        
cufflinks 0.693       Low
cufflinks 4.132       High
cufflinks 0.817       Low
cufflinks 1.83        
cufflinks 2.538        
cufflinks 1.405        

0 Strain