Gene : Medtr1g007920 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR32295:SF33 - PROTEIN IQ-DOMAIN 21 Description:  IQ calmodulin-binding motif protein
Genomic Order:  94 Name:  ? Medtr1g007920
Secondary Identifier:  ? PAC:31098843
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g007920 0.5kb upstream 0.5kb upstream 5004 true chr1: 623232-628235 Medicago truncatula
Medtr1g007920 0.5kb upstream 0.5kb upstream 500 false chr1: 627736-628235 Medicago truncatula
Medtr1g007920 0.5kb downstream 0.5kb downstream 5004 true chr1: 622732-627735 Medicago truncatula
Medtr1g007920 0.5kb downstream 0.5kb downstream 500 false chr1: 622732-623231 Medicago truncatula
Medtr1g007920 1.0kb upstream 1.0kb upstream 5504 true chr1: 623232-628735 Medicago truncatula
Medtr1g007920 1.0kb upstream 1.0kb upstream 1000 false chr1: 627736-628735 Medicago truncatula
Medtr1g007920 1.0kb downstream 1.0kb downstream 5504 true chr1: 622232-627735 Medicago truncatula
Medtr1g007920 1.0kb downstream 1.0kb downstream 1000 false chr1: 622232-623231 Medicago truncatula
Medtr1g007920 2.0kb upstream 2.0kb upstream 6504 true chr1: 623232-629735 Medicago truncatula
Medtr1g007920 2.0kb upstream 2.0kb upstream 2000 false chr1: 627736-629735 Medicago truncatula
Medtr1g007920 2.0kb downstream 2.0kb downstream 6504 true chr1: 621232-627735 Medicago truncatula
Medtr1g007920 2.0kb downstream 2.0kb downstream 2000 false chr1: 621232-623231 Medicago truncatula
Medtr1g007920 5.0kb upstream 5.0kb upstream 9504 true chr1: 623232-632735 Medicago truncatula
Medtr1g007920 5.0kb upstream 5.0kb upstream 5000 false chr1: 627736-632735 Medicago truncatula
Medtr1g007920 5.0kb downstream 5.0kb downstream 9504 true chr1: 618232-627735 Medicago truncatula
Medtr1g007920 5.0kb downstream 5.0kb downstream 5000 false chr1: 618232-623231 Medicago truncatula
Medtr1g007920 10.0kb upstream 10.0kb upstream 14504 true chr1: 623232-637735 Medicago truncatula
Medtr1g007920 10.0kb upstream 10.0kb upstream 10000 false chr1: 627736-637735 Medicago truncatula
Medtr1g007920 10.0kb downstream 10.0kb downstream 14504 true chr1: 613232-627735 Medicago truncatula
Medtr1g007920 10.0kb downstream 10.0kb downstream 10000 false chr1: 613232-623231 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311115 5265 Fabidae View MSA
124061154 5270 Rosid View MSA
123748738 5271 Pentapetalae View MSA
122793664 5272 Eudicot View MSA
122049723 5273 Angiosperm View MSA
121311558 5274 Embryophyte View MSA
123348838 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.437     High High
cufflinks 1.157       Low
cufflinks 1.324        
cufflinks 4.598        
cufflinks 1.5        
cufflinks 6.339        
cufflinks 14.046     High High
cufflinks 1.127       Low
cufflinks 4.902        

0 Strain