Gene : Medtr1g008140 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR31707:SF8 - PECTINESTERASE/PECTINESTERASE INHIBITOR 34-RELATED Description:  pectinesterase/pectinesterase inhibitor
Genomic Order:  106 Name:  ? Medtr1g008140
Secondary Identifier:  ? PAC:31099138
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-1081 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g008140 0.5kb upstream 0.5kb upstream 4417 true chr1: 744520-748936 Medicago truncatula
Medtr1g008140 0.5kb upstream 0.5kb upstream 500 false chr1: 748437-748936 Medicago truncatula
Medtr1g008140 0.5kb downstream 0.5kb downstream 4417 true chr1: 744020-748436 Medicago truncatula
Medtr1g008140 0.5kb downstream 0.5kb downstream 500 false chr1: 744020-744519 Medicago truncatula
Medtr1g008140 1.0kb upstream 1.0kb upstream 4917 true chr1: 744520-749436 Medicago truncatula
Medtr1g008140 1.0kb upstream 1.0kb upstream 1000 false chr1: 748437-749436 Medicago truncatula
Medtr1g008140 1.0kb downstream 1.0kb downstream 4917 true chr1: 743520-748436 Medicago truncatula
Medtr1g008140 1.0kb downstream 1.0kb downstream 1000 false chr1: 743520-744519 Medicago truncatula
Medtr1g008140 2.0kb upstream 2.0kb upstream 5917 true chr1: 744520-750436 Medicago truncatula
Medtr1g008140 2.0kb upstream 2.0kb upstream 2000 false chr1: 748437-750436 Medicago truncatula
Medtr1g008140 2.0kb downstream 2.0kb downstream 5917 true chr1: 742520-748436 Medicago truncatula
Medtr1g008140 2.0kb downstream 2.0kb downstream 2000 false chr1: 742520-744519 Medicago truncatula
Medtr1g008140 5.0kb upstream 5.0kb upstream 8917 true chr1: 744520-753436 Medicago truncatula
Medtr1g008140 5.0kb upstream 5.0kb upstream 5000 false chr1: 748437-753436 Medicago truncatula
Medtr1g008140 5.0kb downstream 5.0kb downstream 8917 true chr1: 739520-748436 Medicago truncatula
Medtr1g008140 5.0kb downstream 5.0kb downstream 5000 false chr1: 739520-744519 Medicago truncatula
Medtr1g008140 10.0kb upstream 10.0kb upstream 13917 true chr1: 744520-758436 Medicago truncatula
Medtr1g008140 10.0kb upstream 10.0kb upstream 10000 false chr1: 748437-758436 Medicago truncatula
Medtr1g008140 10.0kb downstream 10.0kb downstream 13917 true chr1: 734520-748436 Medicago truncatula
Medtr1g008140 10.0kb downstream 10.0kb downstream 10000 false chr1: 734520-744519 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310193 5265 Fabidae View MSA
124065220 5270 Rosid View MSA
123746199 5271 Pentapetalae View MSA
122794152 5272 Eudicot View MSA
122043800 5273 Angiosperm View MSA
121350573 5274 Embryophyte View MSA
123381802 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.928        
cufflinks 4.076       High
cufflinks 2.679        
cufflinks 0.585       Low
cufflinks 3.238        
cufflinks 0.39       Low
cufflinks 0.689        
cufflinks 2.413        
cufflinks 2.84        

0 Strain