Gene : Medtr1g008170 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR12356:SF3 - NUCLEAR MIGRATION PROTEIN NUDC Description:  nuclear movement family protein
Genomic Order:  108 Name:  ? Medtr1g008170
Secondary Identifier:  ? PAC:31097522
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g008170 0.5kb upstream 0.5kb upstream 3282 true chr1: 769625-772906 Medicago truncatula
Medtr1g008170 0.5kb upstream 0.5kb upstream 500 false chr1: 772407-772906 Medicago truncatula
Medtr1g008170 0.5kb downstream 0.5kb downstream 3282 true chr1: 769125-772406 Medicago truncatula
Medtr1g008170 0.5kb downstream 0.5kb downstream 500 false chr1: 769125-769624 Medicago truncatula
Medtr1g008170 1.0kb upstream 1.0kb upstream 3782 true chr1: 769625-773406 Medicago truncatula
Medtr1g008170 1.0kb upstream 1.0kb upstream 1000 false chr1: 772407-773406 Medicago truncatula
Medtr1g008170 1.0kb downstream 1.0kb downstream 3782 true chr1: 768625-772406 Medicago truncatula
Medtr1g008170 1.0kb downstream 1.0kb downstream 1000 false chr1: 768625-769624 Medicago truncatula
Medtr1g008170 2.0kb upstream 2.0kb upstream 4782 true chr1: 769625-774406 Medicago truncatula
Medtr1g008170 2.0kb upstream 2.0kb upstream 2000 false chr1: 772407-774406 Medicago truncatula
Medtr1g008170 2.0kb downstream 2.0kb downstream 4782 true chr1: 767625-772406 Medicago truncatula
Medtr1g008170 2.0kb downstream 2.0kb downstream 2000 false chr1: 767625-769624 Medicago truncatula
Medtr1g008170 5.0kb upstream 5.0kb upstream 7782 true chr1: 769625-777406 Medicago truncatula
Medtr1g008170 5.0kb upstream 5.0kb upstream 5000 false chr1: 772407-777406 Medicago truncatula
Medtr1g008170 5.0kb downstream 5.0kb downstream 7782 true chr1: 764625-772406 Medicago truncatula
Medtr1g008170 5.0kb downstream 5.0kb downstream 5000 false chr1: 764625-769624 Medicago truncatula
Medtr1g008170 10.0kb upstream 10.0kb upstream 12782 true chr1: 769625-782406 Medicago truncatula
Medtr1g008170 10.0kb upstream 10.0kb upstream 10000 false chr1: 772407-782406 Medicago truncatula
Medtr1g008170 10.0kb downstream 10.0kb downstream 12782 true chr1: 759625-772406 Medicago truncatula
Medtr1g008170 10.0kb downstream 10.0kb downstream 10000 false chr1: 759625-769624 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122271314 5265 Fabidae View MSA
124064550 5270 Rosid View MSA
123752804 5271 Pentapetalae View MSA
122796165 5272 Eudicot View MSA
122044213 5273 Angiosperm View MSA
121350395 5274 Embryophyte View MSA
123424343 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.077        
cufflinks 0.043     Low  
cufflinks 0.017     Low Low
cufflinks 0.152        
cufflinks 0.038     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.134        
cufflinks 0.011     Low Low
cufflinks 0.214       High

0 Strain