Gene : Medtr1g009660 M. truncatula Mt4.0v1
Defline:  (1 of 8) PF07839 - Plant calmodulin-binding domain (CaM_binding) Description:  hypothetical protein
Genomic Order:  194 Name:  ? Medtr1g009660
Secondary Identifier:  ? PAC:31093489
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g009660 0.5kb upstream 0.5kb upstream 3834 true chr1: 1422158-1425991 Medicago truncatula
Medtr1g009660 0.5kb upstream 0.5kb upstream 500 false chr1: 1425492-1425991 Medicago truncatula
Medtr1g009660 0.5kb downstream 0.5kb downstream 3834 true chr1: 1421658-1425491 Medicago truncatula
Medtr1g009660 0.5kb downstream 0.5kb downstream 500 false chr1: 1421658-1422157 Medicago truncatula
Medtr1g009660 1.0kb upstream 1.0kb upstream 4334 true chr1: 1422158-1426491 Medicago truncatula
Medtr1g009660 1.0kb upstream 1.0kb upstream 1000 false chr1: 1425492-1426491 Medicago truncatula
Medtr1g009660 1.0kb downstream 1.0kb downstream 4334 true chr1: 1421158-1425491 Medicago truncatula
Medtr1g009660 1.0kb downstream 1.0kb downstream 1000 false chr1: 1421158-1422157 Medicago truncatula
Medtr1g009660 2.0kb upstream 2.0kb upstream 5334 true chr1: 1422158-1427491 Medicago truncatula
Medtr1g009660 2.0kb upstream 2.0kb upstream 2000 false chr1: 1425492-1427491 Medicago truncatula
Medtr1g009660 2.0kb downstream 2.0kb downstream 5334 true chr1: 1420158-1425491 Medicago truncatula
Medtr1g009660 2.0kb downstream 2.0kb downstream 2000 false chr1: 1420158-1422157 Medicago truncatula
Medtr1g009660 5.0kb upstream 5.0kb upstream 8334 true chr1: 1422158-1430491 Medicago truncatula
Medtr1g009660 5.0kb upstream 5.0kb upstream 5000 false chr1: 1425492-1430491 Medicago truncatula
Medtr1g009660 5.0kb downstream 5.0kb downstream 8334 true chr1: 1417158-1425491 Medicago truncatula
Medtr1g009660 5.0kb downstream 5.0kb downstream 5000 false chr1: 1417158-1422157 Medicago truncatula
Medtr1g009660 10.0kb upstream 10.0kb upstream 13334 true chr1: 1422158-1435491 Medicago truncatula
Medtr1g009660 10.0kb upstream 10.0kb upstream 10000 false chr1: 1425492-1435491 Medicago truncatula
Medtr1g009660 10.0kb downstream 10.0kb downstream 13334 true chr1: 1412158-1425491 Medicago truncatula
Medtr1g009660 10.0kb downstream 10.0kb downstream 10000 false chr1: 1412158-1422157 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310944 5265 Fabidae View MSA
124067420 5270 Rosid View MSA
123738359 5271 Pentapetalae View MSA
122791450 5272 Eudicot View MSA
122049336 5273 Angiosperm View MSA
121311351 5274 Embryophyte View MSA
123348657 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.364       High
cufflinks 0.086        
cufflinks 0.102        
cufflinks 0.021     Low  
cufflinks 0.146        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low Low
cufflinks 0.042     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain