Gene : Medtr1g056460 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR13673 - ESOPHAGEAL CANCER ASSOCIATED PROTEIN Description:  esophageal cancer associated protein, putative
Genomic Order:  3015 Name:  ? Medtr1g056460
Secondary Identifier:  ? PAC:31098533
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g056460 0.5kb upstream 0.5kb upstream 18303 true chr1: 24749967-24768269 Medicago truncatula
Medtr1g056460 0.5kb upstream 0.5kb upstream 500 false chr1: 24749967-24750466 Medicago truncatula
Medtr1g056460 0.5kb downstream 0.5kb downstream 18303 true chr1: 24750467-24768769 Medicago truncatula
Medtr1g056460 0.5kb downstream 0.5kb downstream 500 false chr1: 24768270-24768769 Medicago truncatula
Medtr1g056460 1.0kb upstream 1.0kb upstream 18803 true chr1: 24749467-24768269 Medicago truncatula
Medtr1g056460 1.0kb upstream 1.0kb upstream 1000 false chr1: 24749467-24750466 Medicago truncatula
Medtr1g056460 1.0kb downstream 1.0kb downstream 18803 true chr1: 24750467-24769269 Medicago truncatula
Medtr1g056460 1.0kb downstream 1.0kb downstream 1000 false chr1: 24768270-24769269 Medicago truncatula
Medtr1g056460 2.0kb upstream 2.0kb upstream 19803 true chr1: 24748467-24768269 Medicago truncatula
Medtr1g056460 2.0kb upstream 2.0kb upstream 2000 false chr1: 24748467-24750466 Medicago truncatula
Medtr1g056460 2.0kb downstream 2.0kb downstream 19803 true chr1: 24750467-24770269 Medicago truncatula
Medtr1g056460 2.0kb downstream 2.0kb downstream 2000 false chr1: 24768270-24770269 Medicago truncatula
Medtr1g056460 5.0kb upstream 5.0kb upstream 22803 true chr1: 24745467-24768269 Medicago truncatula
Medtr1g056460 5.0kb upstream 5.0kb upstream 5000 false chr1: 24745467-24750466 Medicago truncatula
Medtr1g056460 5.0kb downstream 5.0kb downstream 22803 true chr1: 24750467-24773269 Medicago truncatula
Medtr1g056460 5.0kb downstream 5.0kb downstream 5000 false chr1: 24768270-24773269 Medicago truncatula
Medtr1g056460 10.0kb upstream 10.0kb upstream 27803 true chr1: 24740467-24768269 Medicago truncatula
Medtr1g056460 10.0kb upstream 10.0kb upstream 10000 false chr1: 24740467-24750466 Medicago truncatula
Medtr1g056460 10.0kb downstream 10.0kb downstream 27803 true chr1: 24750467-24778269 Medicago truncatula
Medtr1g056460 10.0kb downstream 10.0kb downstream 10000 false chr1: 24768270-24778269 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791819 5273 Angiosperm View MSA
122300410 5265 Fabidae View MSA
124069469 5270 Rosid View MSA
123741968 5271 Pentapetalae View MSA
122794162 5272 Eudicot View MSA
121348229 5274 Embryophyte View MSA
123380782 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.523       High
cufflinks 0.333        
cufflinks 0.537       High
cufflinks 0.272       Low
cufflinks 0.484        
cufflinks 0.341        
cufflinks 0.461        
cufflinks 0.352        
cufflinks 0.297       Low

0 Strain