Gene : Medtr1g057150 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11638//PTHR11638:SF69 - ATP-DEPENDENT CLP PROTEASE Description:  double Clp-N motif P-loop nucleoside triphosphate hydrolase superfamily protein
Genomic Order:  3049 Name:  ? Medtr1g057150
Secondary Identifier:  ? PAC:31100115
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g057150 0.5kb upstream 0.5kb upstream 4794 true chr1: 25116916-25121709 Medicago truncatula
Medtr1g057150 0.5kb upstream 0.5kb upstream 500 false chr1: 25116916-25117415 Medicago truncatula
Medtr1g057150 0.5kb downstream 0.5kb downstream 4794 true chr1: 25117416-25122209 Medicago truncatula
Medtr1g057150 0.5kb downstream 0.5kb downstream 500 false chr1: 25121710-25122209 Medicago truncatula
Medtr1g057150 1.0kb upstream 1.0kb upstream 5294 true chr1: 25116416-25121709 Medicago truncatula
Medtr1g057150 1.0kb upstream 1.0kb upstream 1000 false chr1: 25116416-25117415 Medicago truncatula
Medtr1g057150 1.0kb downstream 1.0kb downstream 5294 true chr1: 25117416-25122709 Medicago truncatula
Medtr1g057150 1.0kb downstream 1.0kb downstream 1000 false chr1: 25121710-25122709 Medicago truncatula
Medtr1g057150 2.0kb upstream 2.0kb upstream 6294 true chr1: 25115416-25121709 Medicago truncatula
Medtr1g057150 2.0kb upstream 2.0kb upstream 2000 false chr1: 25115416-25117415 Medicago truncatula
Medtr1g057150 2.0kb downstream 2.0kb downstream 6294 true chr1: 25117416-25123709 Medicago truncatula
Medtr1g057150 2.0kb downstream 2.0kb downstream 2000 false chr1: 25121710-25123709 Medicago truncatula
Medtr1g057150 5.0kb upstream 5.0kb upstream 9294 true chr1: 25112416-25121709 Medicago truncatula
Medtr1g057150 5.0kb upstream 5.0kb upstream 5000 false chr1: 25112416-25117415 Medicago truncatula
Medtr1g057150 5.0kb downstream 5.0kb downstream 9294 true chr1: 25117416-25126709 Medicago truncatula
Medtr1g057150 5.0kb downstream 5.0kb downstream 5000 false chr1: 25121710-25126709 Medicago truncatula
Medtr1g057150 10.0kb upstream 10.0kb upstream 14294 true chr1: 25107416-25121709 Medicago truncatula
Medtr1g057150 10.0kb upstream 10.0kb upstream 10000 false chr1: 25107416-25117415 Medicago truncatula
Medtr1g057150 10.0kb downstream 10.0kb downstream 14294 true chr1: 25117416-25131709 Medicago truncatula
Medtr1g057150 10.0kb downstream 10.0kb downstream 10000 false chr1: 25121710-25131709 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306559 5265 Fabidae View MSA
124070007 5270 Rosid View MSA
123743418 5271 Pentapetalae View MSA
122787302 5272 Eudicot View MSA
122049419 5273 Angiosperm View MSA
121351273 5274 Embryophyte View MSA
123382090 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.026        
cufflinks 0.849        
cufflinks 0.831        
cufflinks 0.72        
cufflinks 0.947        
cufflinks 1.706       High
cufflinks 1.083        
cufflinks 0.799        
cufflinks 0.668       Low

0 Strain