Gene : Medtr1g056890 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR10917 - DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC3 Description:  DNA-directed RNA polymerase I, II
Genomic Order:  3029 Name:  ? Medtr1g056890
Secondary Identifier:  ? PAC:31098920
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g056890 0.5kb upstream 0.5kb upstream 4351 true chr1: 24911971-24916321 Medicago truncatula
Medtr1g056890 0.5kb upstream 0.5kb upstream 500 false chr1: 24915822-24916321 Medicago truncatula
Medtr1g056890 0.5kb downstream 0.5kb downstream 4351 true chr1: 24911471-24915821 Medicago truncatula
Medtr1g056890 0.5kb downstream 0.5kb downstream 500 false chr1: 24911471-24911970 Medicago truncatula
Medtr1g056890 1.0kb upstream 1.0kb upstream 4851 true chr1: 24911971-24916821 Medicago truncatula
Medtr1g056890 1.0kb upstream 1.0kb upstream 1000 false chr1: 24915822-24916821 Medicago truncatula
Medtr1g056890 1.0kb downstream 1.0kb downstream 4851 true chr1: 24910971-24915821 Medicago truncatula
Medtr1g056890 1.0kb downstream 1.0kb downstream 1000 false chr1: 24910971-24911970 Medicago truncatula
Medtr1g056890 2.0kb upstream 2.0kb upstream 5851 true chr1: 24911971-24917821 Medicago truncatula
Medtr1g056890 2.0kb upstream 2.0kb upstream 2000 false chr1: 24915822-24917821 Medicago truncatula
Medtr1g056890 2.0kb downstream 2.0kb downstream 5851 true chr1: 24909971-24915821 Medicago truncatula
Medtr1g056890 2.0kb downstream 2.0kb downstream 2000 false chr1: 24909971-24911970 Medicago truncatula
Medtr1g056890 5.0kb upstream 5.0kb upstream 8851 true chr1: 24911971-24920821 Medicago truncatula
Medtr1g056890 5.0kb upstream 5.0kb upstream 5000 false chr1: 24915822-24920821 Medicago truncatula
Medtr1g056890 5.0kb downstream 5.0kb downstream 8851 true chr1: 24906971-24915821 Medicago truncatula
Medtr1g056890 5.0kb downstream 5.0kb downstream 5000 false chr1: 24906971-24911970 Medicago truncatula
Medtr1g056890 10.0kb upstream 10.0kb upstream 13851 true chr1: 24911971-24925821 Medicago truncatula
Medtr1g056890 10.0kb upstream 10.0kb upstream 10000 false chr1: 24915822-24925821 Medicago truncatula
Medtr1g056890 10.0kb downstream 10.0kb downstream 13851 true chr1: 24901971-24915821 Medicago truncatula
Medtr1g056890 10.0kb downstream 10.0kb downstream 10000 false chr1: 24901971-24911970 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304459 5265 Fabidae View MSA
124064544 5270 Rosid View MSA
123742765 5271 Pentapetalae View MSA
122785974 5272 Eudicot View MSA
122051264 5273 Angiosperm View MSA
121346486 5274 Embryophyte View MSA
123424696 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.419        
cufflinks 3.392       Low
cufflinks 4.271        
cufflinks 4.216        
cufflinks 4.501        
cufflinks 4.056        
cufflinks 5.513        
cufflinks 3.387       Low
cufflinks 7.276       High

0 Strain