Gene : Medtr1g058390 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR14009:SF9 - LETM1-LIKE PROTEIN Description:  LETM1-like protein
Genomic Order:  3119 Name:  ? Medtr1g058390
Secondary Identifier:  ? PAC:31100026
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g058390 0.5kb upstream 0.5kb upstream 13472 true chr1: 25707796-25721267 Medicago truncatula
Medtr1g058390 0.5kb upstream 0.5kb upstream 500 false chr1: 25720768-25721267 Medicago truncatula
Medtr1g058390 0.5kb downstream 0.5kb downstream 13472 true chr1: 25707296-25720767 Medicago truncatula
Medtr1g058390 0.5kb downstream 0.5kb downstream 500 false chr1: 25707296-25707795 Medicago truncatula
Medtr1g058390 1.0kb upstream 1.0kb upstream 13972 true chr1: 25707796-25721767 Medicago truncatula
Medtr1g058390 1.0kb upstream 1.0kb upstream 1000 false chr1: 25720768-25721767 Medicago truncatula
Medtr1g058390 1.0kb downstream 1.0kb downstream 13972 true chr1: 25706796-25720767 Medicago truncatula
Medtr1g058390 1.0kb downstream 1.0kb downstream 1000 false chr1: 25706796-25707795 Medicago truncatula
Medtr1g058390 2.0kb upstream 2.0kb upstream 14972 true chr1: 25707796-25722767 Medicago truncatula
Medtr1g058390 2.0kb upstream 2.0kb upstream 2000 false chr1: 25720768-25722767 Medicago truncatula
Medtr1g058390 2.0kb downstream 2.0kb downstream 14972 true chr1: 25705796-25720767 Medicago truncatula
Medtr1g058390 2.0kb downstream 2.0kb downstream 2000 false chr1: 25705796-25707795 Medicago truncatula
Medtr1g058390 5.0kb upstream 5.0kb upstream 17972 true chr1: 25707796-25725767 Medicago truncatula
Medtr1g058390 5.0kb upstream 5.0kb upstream 5000 false chr1: 25720768-25725767 Medicago truncatula
Medtr1g058390 5.0kb downstream 5.0kb downstream 17972 true chr1: 25702796-25720767 Medicago truncatula
Medtr1g058390 5.0kb downstream 5.0kb downstream 5000 false chr1: 25702796-25707795 Medicago truncatula
Medtr1g058390 10.0kb upstream 10.0kb upstream 22972 true chr1: 25707796-25730767 Medicago truncatula
Medtr1g058390 10.0kb upstream 10.0kb upstream 10000 false chr1: 25720768-25730767 Medicago truncatula
Medtr1g058390 10.0kb downstream 10.0kb downstream 22972 true chr1: 25697796-25720767 Medicago truncatula
Medtr1g058390 10.0kb downstream 10.0kb downstream 10000 false chr1: 25697796-25707795 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304547 5265 Fabidae View MSA
124063652 5270 Rosid View MSA
123740190 5271 Pentapetalae View MSA
122788808 5272 Eudicot View MSA
122047969 5273 Angiosperm View MSA
121348078 5274 Embryophyte View MSA
123380722 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.974        
cufflinks 1.928        
cufflinks 2.879       High
cufflinks 0.258       Low
cufflinks 2.141        
cufflinks 0.247       Low
cufflinks 0.587        
cufflinks 2.53       High
cufflinks 0.336        

0 Strain