Gene : Medtr1g058350 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR31140:SF2 - B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR VAL3 Description:  B3 DNA-binding domain protein
Genomic Order:  3116 Name:  ? Medtr1g058350
Secondary Identifier:  ? PAC:31097237
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g058350 0.5kb upstream 0.5kb upstream 2700 true chr1: 25689987-25692686 Medicago truncatula
Medtr1g058350 0.5kb upstream 0.5kb upstream 500 false chr1: 25689987-25690486 Medicago truncatula
Medtr1g058350 0.5kb downstream 0.5kb downstream 2700 true chr1: 25690487-25693186 Medicago truncatula
Medtr1g058350 0.5kb downstream 0.5kb downstream 500 false chr1: 25692687-25693186 Medicago truncatula
Medtr1g058350 1.0kb upstream 1.0kb upstream 3200 true chr1: 25689487-25692686 Medicago truncatula
Medtr1g058350 1.0kb upstream 1.0kb upstream 1000 false chr1: 25689487-25690486 Medicago truncatula
Medtr1g058350 1.0kb downstream 1.0kb downstream 3200 true chr1: 25690487-25693686 Medicago truncatula
Medtr1g058350 1.0kb downstream 1.0kb downstream 1000 false chr1: 25692687-25693686 Medicago truncatula
Medtr1g058350 2.0kb upstream 2.0kb upstream 4200 true chr1: 25688487-25692686 Medicago truncatula
Medtr1g058350 2.0kb upstream 2.0kb upstream 2000 false chr1: 25688487-25690486 Medicago truncatula
Medtr1g058350 2.0kb downstream 2.0kb downstream 4200 true chr1: 25690487-25694686 Medicago truncatula
Medtr1g058350 2.0kb downstream 2.0kb downstream 2000 false chr1: 25692687-25694686 Medicago truncatula
Medtr1g058350 5.0kb upstream 5.0kb upstream 7200 true chr1: 25685487-25692686 Medicago truncatula
Medtr1g058350 5.0kb upstream 5.0kb upstream 5000 false chr1: 25685487-25690486 Medicago truncatula
Medtr1g058350 5.0kb downstream 5.0kb downstream 7200 true chr1: 25690487-25697686 Medicago truncatula
Medtr1g058350 5.0kb downstream 5.0kb downstream 5000 false chr1: 25692687-25697686 Medicago truncatula
Medtr1g058350 10.0kb upstream 10.0kb upstream 12200 true chr1: 25680487-25692686 Medicago truncatula
Medtr1g058350 10.0kb upstream 10.0kb upstream 10000 false chr1: 25680487-25690486 Medicago truncatula
Medtr1g058350 10.0kb downstream 10.0kb downstream 12200 true chr1: 25690487-25702686 Medicago truncatula
Medtr1g058350 10.0kb downstream 10.0kb downstream 10000 false chr1: 25692687-25702686 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306788 5265 Fabidae View MSA
124063141 5270 Rosid View MSA
123743640 5271 Pentapetalae View MSA
122794380 5272 Eudicot View MSA
122049835 5273 Angiosperm View MSA
121349423 5274 Embryophyte View MSA
123428387 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 29.721     High High
cufflinks 11.51     High  
cufflinks 10.048     High  
cufflinks 1.882        
cufflinks 9.597        
cufflinks 0.522       Low
cufflinks 2.301        
cufflinks 10.729     High  
cufflinks 1.692        

0 Strain