Gene : Medtr1g059900 M. truncatula Mt4.0v1
Defline:  (1 of 6) PTHR18952:SF100 - ALPHA CARBONIC ANHYDRASE 5 Description:  eukaryotic-type carbonic anhydrase
Genomic Order:  3160 Name:  ? Medtr1g059900
Secondary Identifier:  ? PAC:31100238
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula CYANCAT-PWY Medicago truncatula pathologic  
Mtruncatula PWY-241 Medicago truncatula pathologic  
Mtruncatula PWY-7115 Medicago truncatula pathologic  
Mtruncatula PWY-7117 Medicago truncatula pathologic  
Mtruncatula PWYQT-4429 Medicago truncatula pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g059900 0.5kb upstream 0.5kb upstream 4086 true chr1: 26071156-26075241 Medicago truncatula
Medtr1g059900 0.5kb upstream 0.5kb upstream 500 false chr1: 26074742-26075241 Medicago truncatula
Medtr1g059900 0.5kb downstream 0.5kb downstream 4086 true chr1: 26070656-26074741 Medicago truncatula
Medtr1g059900 0.5kb downstream 0.5kb downstream 500 false chr1: 26070656-26071155 Medicago truncatula
Medtr1g059900 1.0kb upstream 1.0kb upstream 4586 true chr1: 26071156-26075741 Medicago truncatula
Medtr1g059900 1.0kb upstream 1.0kb upstream 1000 false chr1: 26074742-26075741 Medicago truncatula
Medtr1g059900 1.0kb downstream 1.0kb downstream 4586 true chr1: 26070156-26074741 Medicago truncatula
Medtr1g059900 1.0kb downstream 1.0kb downstream 1000 false chr1: 26070156-26071155 Medicago truncatula
Medtr1g059900 2.0kb upstream 2.0kb upstream 5586 true chr1: 26071156-26076741 Medicago truncatula
Medtr1g059900 2.0kb upstream 2.0kb upstream 2000 false chr1: 26074742-26076741 Medicago truncatula
Medtr1g059900 2.0kb downstream 2.0kb downstream 5586 true chr1: 26069156-26074741 Medicago truncatula
Medtr1g059900 2.0kb downstream 2.0kb downstream 2000 false chr1: 26069156-26071155 Medicago truncatula
Medtr1g059900 5.0kb upstream 5.0kb upstream 8586 true chr1: 26071156-26079741 Medicago truncatula
Medtr1g059900 5.0kb upstream 5.0kb upstream 5000 false chr1: 26074742-26079741 Medicago truncatula
Medtr1g059900 5.0kb downstream 5.0kb downstream 8586 true chr1: 26066156-26074741 Medicago truncatula
Medtr1g059900 5.0kb downstream 5.0kb downstream 5000 false chr1: 26066156-26071155 Medicago truncatula
Medtr1g059900 10.0kb upstream 10.0kb upstream 13586 true chr1: 26071156-26084741 Medicago truncatula
Medtr1g059900 10.0kb upstream 10.0kb upstream 10000 false chr1: 26074742-26084741 Medicago truncatula
Medtr1g059900 10.0kb downstream 10.0kb downstream 13586 true chr1: 26061156-26074741 Medicago truncatula
Medtr1g059900 10.0kb downstream 10.0kb downstream 10000 false chr1: 26061156-26071155 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313060 5265 Fabidae View MSA
124052628 5270 Rosid View MSA
123746291 5271 Pentapetalae View MSA
122797456 5272 Eudicot View MSA
122049694 5273 Angiosperm View MSA
121351630 5274 Embryophyte View MSA
123428273 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.147     High  
cufflinks 0.008     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain