Gene : Medtr1g059940 M. truncatula Mt4.0v1
Defline:  (1 of 6) PTHR18952:SF100 - ALPHA CARBONIC ANHYDRASE 5 Description:  eukaryotic-type carbonic anhydrase
Genomic Order:  3162 Name:  ? Medtr1g059940
Secondary Identifier:  ? PAC:31098153
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5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula CYANCAT-PWY Medicago truncatula pathologic  
Mtruncatula PWY-241 Medicago truncatula pathologic  
Mtruncatula PWY-7115 Medicago truncatula pathologic  
Mtruncatula PWY-7117 Medicago truncatula pathologic  
Mtruncatula PWYQT-4429 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g059940 0.5kb upstream 0.5kb upstream 4826 true chr1: 26090175-26095000 Medicago truncatula
Medtr1g059940 0.5kb upstream 0.5kb upstream 500 false chr1: 26094501-26095000 Medicago truncatula
Medtr1g059940 0.5kb downstream 0.5kb downstream 4826 true chr1: 26089675-26094500 Medicago truncatula
Medtr1g059940 0.5kb downstream 0.5kb downstream 500 false chr1: 26089675-26090174 Medicago truncatula
Medtr1g059940 1.0kb upstream 1.0kb upstream 5326 true chr1: 26090175-26095500 Medicago truncatula
Medtr1g059940 1.0kb upstream 1.0kb upstream 1000 false chr1: 26094501-26095500 Medicago truncatula
Medtr1g059940 1.0kb downstream 1.0kb downstream 5326 true chr1: 26089175-26094500 Medicago truncatula
Medtr1g059940 1.0kb downstream 1.0kb downstream 1000 false chr1: 26089175-26090174 Medicago truncatula
Medtr1g059940 2.0kb upstream 2.0kb upstream 6326 true chr1: 26090175-26096500 Medicago truncatula
Medtr1g059940 2.0kb upstream 2.0kb upstream 2000 false chr1: 26094501-26096500 Medicago truncatula
Medtr1g059940 2.0kb downstream 2.0kb downstream 6326 true chr1: 26088175-26094500 Medicago truncatula
Medtr1g059940 2.0kb downstream 2.0kb downstream 2000 false chr1: 26088175-26090174 Medicago truncatula
Medtr1g059940 5.0kb upstream 5.0kb upstream 9326 true chr1: 26090175-26099500 Medicago truncatula
Medtr1g059940 5.0kb upstream 5.0kb upstream 5000 false chr1: 26094501-26099500 Medicago truncatula
Medtr1g059940 5.0kb downstream 5.0kb downstream 9326 true chr1: 26085175-26094500 Medicago truncatula
Medtr1g059940 5.0kb downstream 5.0kb downstream 5000 false chr1: 26085175-26090174 Medicago truncatula
Medtr1g059940 10.0kb upstream 10.0kb upstream 14326 true chr1: 26090175-26104500 Medicago truncatula
Medtr1g059940 10.0kb upstream 10.0kb upstream 10000 false chr1: 26094501-26104500 Medicago truncatula
Medtr1g059940 10.0kb downstream 10.0kb downstream 14326 true chr1: 26080175-26094500 Medicago truncatula
Medtr1g059940 10.0kb downstream 10.0kb downstream 10000 false chr1: 26080175-26090174 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301331 5265 Fabidae View MSA
124069270 5270 Rosid View MSA
123746291 5271 Pentapetalae View MSA
122797456 5272 Eudicot View MSA
122049694 5273 Angiosperm View MSA
121351630 5274 Embryophyte View MSA
123428273 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 32.682     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain