Gene : Medtr1g059770 M. truncatula Mt4.0v1
Defline:  (1 of 142) PF02519 - Auxin responsive protein (Auxin_inducible) Description:  SAUR-like auxin-responsive family protein
Genomic Order:  3150 Name:  ? Medtr1g059770
Secondary Identifier:  ? PAC:31096183
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g059770 0.5kb upstream 0.5kb upstream 1364 true chr1: 26007846-26009209 Medicago truncatula
Medtr1g059770 0.5kb upstream 0.5kb upstream 500 false chr1: 26008710-26009209 Medicago truncatula
Medtr1g059770 0.5kb downstream 0.5kb downstream 1364 true chr1: 26007346-26008709 Medicago truncatula
Medtr1g059770 0.5kb downstream 0.5kb downstream 500 false chr1: 26007346-26007845 Medicago truncatula
Medtr1g059770 1.0kb upstream 1.0kb upstream 1864 true chr1: 26007846-26009709 Medicago truncatula
Medtr1g059770 1.0kb upstream 1.0kb upstream 1000 false chr1: 26008710-26009709 Medicago truncatula
Medtr1g059770 1.0kb downstream 1.0kb downstream 1864 true chr1: 26006846-26008709 Medicago truncatula
Medtr1g059770 1.0kb downstream 1.0kb downstream 1000 false chr1: 26006846-26007845 Medicago truncatula
Medtr1g059770 2.0kb upstream 2.0kb upstream 2864 true chr1: 26007846-26010709 Medicago truncatula
Medtr1g059770 2.0kb upstream 2.0kb upstream 2000 false chr1: 26008710-26010709 Medicago truncatula
Medtr1g059770 2.0kb downstream 2.0kb downstream 2864 true chr1: 26005846-26008709 Medicago truncatula
Medtr1g059770 2.0kb downstream 2.0kb downstream 2000 false chr1: 26005846-26007845 Medicago truncatula
Medtr1g059770 5.0kb upstream 5.0kb upstream 5864 true chr1: 26007846-26013709 Medicago truncatula
Medtr1g059770 5.0kb upstream 5.0kb upstream 5000 false chr1: 26008710-26013709 Medicago truncatula
Medtr1g059770 5.0kb downstream 5.0kb downstream 5864 true chr1: 26002846-26008709 Medicago truncatula
Medtr1g059770 5.0kb downstream 5.0kb downstream 5000 false chr1: 26002846-26007845 Medicago truncatula
Medtr1g059770 10.0kb upstream 10.0kb upstream 10864 true chr1: 26007846-26018709 Medicago truncatula
Medtr1g059770 10.0kb upstream 10.0kb upstream 10000 false chr1: 26008710-26018709 Medicago truncatula
Medtr1g059770 10.0kb downstream 10.0kb downstream 10864 true chr1: 25997846-26008709 Medicago truncatula
Medtr1g059770 10.0kb downstream 10.0kb downstream 10000 false chr1: 25997846-26007845 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304573 5265 Fabidae View MSA
124068119 5270 Rosid View MSA
123749819 5271 Pentapetalae View MSA
122788630 5272 Eudicot View MSA
122051602 5273 Angiosperm View MSA
121351344 5274 Embryophyte View MSA
123382129 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.034     Low  
cufflinks 0.043     Low  
cufflinks 0.027     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.013     Low Low
cufflinks 0.919       High
cufflinks 0.185        
cufflinks 0.032     Low  
cufflinks 0.916       High

0 Strain