Gene : Medtr1g059790 M. truncatula Mt4.0v1
Defline:  (1 of 3) 2.7.8.7 - Holo-[acyl-carrier-protein] synthase / PPTase Description:  4'-phosphopantetheinyl transferase family protein
Genomic Order:  3152 Name:  ? Medtr1g059790
Secondary Identifier:  ? PAC:31100078
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-6012-1 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g059790 0.5kb upstream 0.5kb upstream 4236 true chr1: 26015266-26019501 Medicago truncatula
Medtr1g059790 0.5kb upstream 0.5kb upstream 500 false chr1: 26015266-26015765 Medicago truncatula
Medtr1g059790 0.5kb downstream 0.5kb downstream 4236 true chr1: 26015766-26020001 Medicago truncatula
Medtr1g059790 0.5kb downstream 0.5kb downstream 500 false chr1: 26019502-26020001 Medicago truncatula
Medtr1g059790 1.0kb upstream 1.0kb upstream 4736 true chr1: 26014766-26019501 Medicago truncatula
Medtr1g059790 1.0kb upstream 1.0kb upstream 1000 false chr1: 26014766-26015765 Medicago truncatula
Medtr1g059790 1.0kb downstream 1.0kb downstream 4736 true chr1: 26015766-26020501 Medicago truncatula
Medtr1g059790 1.0kb downstream 1.0kb downstream 1000 false chr1: 26019502-26020501 Medicago truncatula
Medtr1g059790 2.0kb upstream 2.0kb upstream 5736 true chr1: 26013766-26019501 Medicago truncatula
Medtr1g059790 2.0kb upstream 2.0kb upstream 2000 false chr1: 26013766-26015765 Medicago truncatula
Medtr1g059790 2.0kb downstream 2.0kb downstream 5736 true chr1: 26015766-26021501 Medicago truncatula
Medtr1g059790 2.0kb downstream 2.0kb downstream 2000 false chr1: 26019502-26021501 Medicago truncatula
Medtr1g059790 5.0kb upstream 5.0kb upstream 8736 true chr1: 26010766-26019501 Medicago truncatula
Medtr1g059790 5.0kb upstream 5.0kb upstream 5000 false chr1: 26010766-26015765 Medicago truncatula
Medtr1g059790 5.0kb downstream 5.0kb downstream 8736 true chr1: 26015766-26024501 Medicago truncatula
Medtr1g059790 5.0kb downstream 5.0kb downstream 5000 false chr1: 26019502-26024501 Medicago truncatula
Medtr1g059790 10.0kb upstream 10.0kb upstream 13736 true chr1: 26005766-26019501 Medicago truncatula
Medtr1g059790 10.0kb upstream 10.0kb upstream 10000 false chr1: 26005766-26015765 Medicago truncatula
Medtr1g059790 10.0kb downstream 10.0kb downstream 13736 true chr1: 26015766-26029501 Medicago truncatula
Medtr1g059790 10.0kb downstream 10.0kb downstream 10000 false chr1: 26019502-26029501 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308786 5265 Fabidae View MSA
124062449 5270 Rosid View MSA
123736560 5271 Pentapetalae View MSA
122793006 5272 Eudicot View MSA
122041832 5273 Angiosperm View MSA
123429078 5275 Viridiplantae View MSA
121344089 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.515        
cufflinks 1.905        
cufflinks 1.836        
cufflinks 1.321        
cufflinks 1.58        
cufflinks 0.471       Low
cufflinks 1.4        
cufflinks 1.773        
cufflinks 0.855        

0 Strain