Gene : Medtr1g059650 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR10555:SF122 - SORTING NEXIN 1 Description:  sorting nexin 2B
Genomic Order:  3142 Name:  ? Medtr1g059650
Secondary Identifier:  ? PAC:31099705
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g059650 0.5kb upstream 0.5kb upstream 7689 true chr1: 25931534-25939222 Medicago truncatula
Medtr1g059650 0.5kb upstream 0.5kb upstream 500 false chr1: 25931534-25932033 Medicago truncatula
Medtr1g059650 0.5kb downstream 0.5kb downstream 7689 true chr1: 25932034-25939722 Medicago truncatula
Medtr1g059650 0.5kb downstream 0.5kb downstream 500 false chr1: 25939223-25939722 Medicago truncatula
Medtr1g059650 1.0kb upstream 1.0kb upstream 8189 true chr1: 25931034-25939222 Medicago truncatula
Medtr1g059650 1.0kb upstream 1.0kb upstream 1000 false chr1: 25931034-25932033 Medicago truncatula
Medtr1g059650 1.0kb downstream 1.0kb downstream 8189 true chr1: 25932034-25940222 Medicago truncatula
Medtr1g059650 1.0kb downstream 1.0kb downstream 1000 false chr1: 25939223-25940222 Medicago truncatula
Medtr1g059650 2.0kb upstream 2.0kb upstream 9189 true chr1: 25930034-25939222 Medicago truncatula
Medtr1g059650 2.0kb upstream 2.0kb upstream 2000 false chr1: 25930034-25932033 Medicago truncatula
Medtr1g059650 2.0kb downstream 2.0kb downstream 9189 true chr1: 25932034-25941222 Medicago truncatula
Medtr1g059650 2.0kb downstream 2.0kb downstream 2000 false chr1: 25939223-25941222 Medicago truncatula
Medtr1g059650 5.0kb upstream 5.0kb upstream 12189 true chr1: 25927034-25939222 Medicago truncatula
Medtr1g059650 5.0kb upstream 5.0kb upstream 5000 false chr1: 25927034-25932033 Medicago truncatula
Medtr1g059650 5.0kb downstream 5.0kb downstream 12189 true chr1: 25932034-25944222 Medicago truncatula
Medtr1g059650 5.0kb downstream 5.0kb downstream 5000 false chr1: 25939223-25944222 Medicago truncatula
Medtr1g059650 10.0kb upstream 10.0kb upstream 17189 true chr1: 25922034-25939222 Medicago truncatula
Medtr1g059650 10.0kb upstream 10.0kb upstream 10000 false chr1: 25922034-25932033 Medicago truncatula
Medtr1g059650 10.0kb downstream 10.0kb downstream 17189 true chr1: 25932034-25949222 Medicago truncatula
Medtr1g059650 10.0kb downstream 10.0kb downstream 10000 false chr1: 25939223-25949222 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300611 5265 Fabidae View MSA
124066249 5270 Rosid View MSA
123741756 5271 Pentapetalae View MSA
122792565 5272 Eudicot View MSA
122045293 5273 Angiosperm View MSA
121345603 5274 Embryophyte View MSA
123428162 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.044        
cufflinks 5.654        
cufflinks 5.692        
cufflinks 2.669       Low
cufflinks 6.085       High
cufflinks 1.978       Low
cufflinks 3.289        
cufflinks 4.81        
cufflinks 3.775        

0 Strain