Gene : Medtr1g059610 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR23083:SF397 - UDP-N-ACETYLGLUCOSAMINE--PEPTIDE N-ACETYLGLUCOSAMINYLTRANSFERASE SPINDLY-RELATED Description:  O-linked N-acetylglucosamine transferase, putative
Genomic Order:  3138 Name:  ? Medtr1g059610
Secondary Identifier:  ? PAC:31095063
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-7437 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g059610 0.5kb upstream 0.5kb upstream 15849 true chr1: 25902172-25918020 Medicago truncatula
Medtr1g059610 0.5kb upstream 0.5kb upstream 500 false chr1: 25917521-25918020 Medicago truncatula
Medtr1g059610 0.5kb downstream 0.5kb downstream 15849 true chr1: 25901672-25917520 Medicago truncatula
Medtr1g059610 0.5kb downstream 0.5kb downstream 500 false chr1: 25901672-25902171 Medicago truncatula
Medtr1g059610 1.0kb upstream 1.0kb upstream 16349 true chr1: 25902172-25918520 Medicago truncatula
Medtr1g059610 1.0kb upstream 1.0kb upstream 1000 false chr1: 25917521-25918520 Medicago truncatula
Medtr1g059610 1.0kb downstream 1.0kb downstream 16349 true chr1: 25901172-25917520 Medicago truncatula
Medtr1g059610 1.0kb downstream 1.0kb downstream 1000 false chr1: 25901172-25902171 Medicago truncatula
Medtr1g059610 2.0kb upstream 2.0kb upstream 17349 true chr1: 25902172-25919520 Medicago truncatula
Medtr1g059610 2.0kb upstream 2.0kb upstream 2000 false chr1: 25917521-25919520 Medicago truncatula
Medtr1g059610 2.0kb downstream 2.0kb downstream 17349 true chr1: 25900172-25917520 Medicago truncatula
Medtr1g059610 2.0kb downstream 2.0kb downstream 2000 false chr1: 25900172-25902171 Medicago truncatula
Medtr1g059610 5.0kb upstream 5.0kb upstream 20349 true chr1: 25902172-25922520 Medicago truncatula
Medtr1g059610 5.0kb upstream 5.0kb upstream 5000 false chr1: 25917521-25922520 Medicago truncatula
Medtr1g059610 5.0kb downstream 5.0kb downstream 20349 true chr1: 25897172-25917520 Medicago truncatula
Medtr1g059610 5.0kb downstream 5.0kb downstream 5000 false chr1: 25897172-25902171 Medicago truncatula
Medtr1g059610 10.0kb upstream 10.0kb upstream 25349 true chr1: 25902172-25927520 Medicago truncatula
Medtr1g059610 10.0kb upstream 10.0kb upstream 10000 false chr1: 25917521-25927520 Medicago truncatula
Medtr1g059610 10.0kb downstream 10.0kb downstream 25349 true chr1: 25892172-25917520 Medicago truncatula
Medtr1g059610 10.0kb downstream 10.0kb downstream 10000 false chr1: 25892172-25902171 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303349 5265 Fabidae View MSA
124065064 5270 Rosid View MSA
123739134 5271 Pentapetalae View MSA
122791595 5272 Eudicot View MSA
122044417 5273 Angiosperm View MSA
121347707 5274 Embryophyte View MSA
123428836 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.442       High
cufflinks 2.612        
cufflinks 13.135     High High
cufflinks 1.459       Low
cufflinks 3.345        
cufflinks 1.811        
cufflinks 2.862        
cufflinks 4.989        
cufflinks 2.268        

0 Strain