Gene : Medtr1g060990 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR21654:SF5 - TRIHELIX TRANSCRIPTION FACTOR PTL Description:  trihelix transcription factor
Genomic Order:  3228 Name:  ? Medtr1g060990
Secondary Identifier:  ? PAC:31096630
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g060990 0.5kb upstream 0.5kb upstream 3747 true chr1: 26596850-26600596 Medicago truncatula
Medtr1g060990 0.5kb upstream 0.5kb upstream 500 false chr1: 26596850-26597349 Medicago truncatula
Medtr1g060990 0.5kb downstream 0.5kb downstream 3747 true chr1: 26597350-26601096 Medicago truncatula
Medtr1g060990 0.5kb downstream 0.5kb downstream 500 false chr1: 26600597-26601096 Medicago truncatula
Medtr1g060990 1.0kb upstream 1.0kb upstream 4247 true chr1: 26596350-26600596 Medicago truncatula
Medtr1g060990 1.0kb upstream 1.0kb upstream 1000 false chr1: 26596350-26597349 Medicago truncatula
Medtr1g060990 1.0kb downstream 1.0kb downstream 4247 true chr1: 26597350-26601596 Medicago truncatula
Medtr1g060990 1.0kb downstream 1.0kb downstream 1000 false chr1: 26600597-26601596 Medicago truncatula
Medtr1g060990 2.0kb upstream 2.0kb upstream 5247 true chr1: 26595350-26600596 Medicago truncatula
Medtr1g060990 2.0kb upstream 2.0kb upstream 2000 false chr1: 26595350-26597349 Medicago truncatula
Medtr1g060990 2.0kb downstream 2.0kb downstream 5247 true chr1: 26597350-26602596 Medicago truncatula
Medtr1g060990 2.0kb downstream 2.0kb downstream 2000 false chr1: 26600597-26602596 Medicago truncatula
Medtr1g060990 5.0kb upstream 5.0kb upstream 8247 true chr1: 26592350-26600596 Medicago truncatula
Medtr1g060990 5.0kb upstream 5.0kb upstream 5000 false chr1: 26592350-26597349 Medicago truncatula
Medtr1g060990 5.0kb downstream 5.0kb downstream 8247 true chr1: 26597350-26605596 Medicago truncatula
Medtr1g060990 5.0kb downstream 5.0kb downstream 5000 false chr1: 26600597-26605596 Medicago truncatula
Medtr1g060990 10.0kb upstream 10.0kb upstream 13247 true chr1: 26587350-26600596 Medicago truncatula
Medtr1g060990 10.0kb upstream 10.0kb upstream 10000 false chr1: 26587350-26597349 Medicago truncatula
Medtr1g060990 10.0kb downstream 10.0kb downstream 13247 true chr1: 26597350-26610596 Medicago truncatula
Medtr1g060990 10.0kb downstream 10.0kb downstream 10000 false chr1: 26600597-26610596 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311371 5265 Fabidae View MSA
124071653 5270 Rosid View MSA
123751862 5271 Pentapetalae View MSA
122786216 5272 Eudicot View MSA
122049868 5273 Angiosperm View MSA
121349901 5274 Embryophyte View MSA
123381491 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.366       High
cufflinks 1.616        
cufflinks 1.229        
cufflinks 0.015     Low Low
cufflinks 3.235        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low Low
cufflinks 1.23        
cufflinks 0.018     Low  

0 Strain