Gene : Medtr1g062250 M. truncatula Mt4.0v1
Defline:  (1 of 1) PF09350 - Domain of unknown function (DUF1992) (DUF1992) Description:  nucleobase:cation symporter, putative
Genomic Order:  3283 Name:  ? Medtr1g062250
Secondary Identifier:  ? PAC:31095033
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g062250 0.5kb upstream 0.5kb upstream 2117 true chr1: 27078338-27080454 Medicago truncatula
Medtr1g062250 0.5kb upstream 0.5kb upstream 500 false chr1: 27078338-27078837 Medicago truncatula
Medtr1g062250 0.5kb downstream 0.5kb downstream 2117 true chr1: 27078838-27080954 Medicago truncatula
Medtr1g062250 0.5kb downstream 0.5kb downstream 500 false chr1: 27080455-27080954 Medicago truncatula
Medtr1g062250 1.0kb upstream 1.0kb upstream 2617 true chr1: 27077838-27080454 Medicago truncatula
Medtr1g062250 1.0kb upstream 1.0kb upstream 1000 false chr1: 27077838-27078837 Medicago truncatula
Medtr1g062250 1.0kb downstream 1.0kb downstream 2617 true chr1: 27078838-27081454 Medicago truncatula
Medtr1g062250 1.0kb downstream 1.0kb downstream 1000 false chr1: 27080455-27081454 Medicago truncatula
Medtr1g062250 2.0kb upstream 2.0kb upstream 3617 true chr1: 27076838-27080454 Medicago truncatula
Medtr1g062250 2.0kb upstream 2.0kb upstream 2000 false chr1: 27076838-27078837 Medicago truncatula
Medtr1g062250 2.0kb downstream 2.0kb downstream 3617 true chr1: 27078838-27082454 Medicago truncatula
Medtr1g062250 2.0kb downstream 2.0kb downstream 2000 false chr1: 27080455-27082454 Medicago truncatula
Medtr1g062250 5.0kb upstream 5.0kb upstream 6617 true chr1: 27073838-27080454 Medicago truncatula
Medtr1g062250 5.0kb upstream 5.0kb upstream 5000 false chr1: 27073838-27078837 Medicago truncatula
Medtr1g062250 5.0kb downstream 5.0kb downstream 6617 true chr1: 27078838-27085454 Medicago truncatula
Medtr1g062250 5.0kb downstream 5.0kb downstream 5000 false chr1: 27080455-27085454 Medicago truncatula
Medtr1g062250 10.0kb upstream 10.0kb upstream 11617 true chr1: 27068838-27080454 Medicago truncatula
Medtr1g062250 10.0kb upstream 10.0kb upstream 10000 false chr1: 27068838-27078837 Medicago truncatula
Medtr1g062250 10.0kb downstream 10.0kb downstream 11617 true chr1: 27078838-27090454 Medicago truncatula
Medtr1g062250 10.0kb downstream 10.0kb downstream 10000 false chr1: 27080455-27090454 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305338 5265 Fabidae View MSA
124071333 5270 Rosid View MSA
123742533 5271 Pentapetalae View MSA
122794128 5272 Eudicot View MSA
122048293 5273 Angiosperm View MSA
121348315 5274 Embryophyte View MSA
123380815 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.157        
cufflinks 8.076        
cufflinks 7.321        
cufflinks 2.335        
cufflinks 10.15       High
cufflinks 0.854       Low
cufflinks 2.653        
cufflinks 7.829        
cufflinks 2.486        

0 Strain