Gene : Medtr1g061800 M. truncatula Mt4.0v1
Defline:  (1 of 1) 4.3.1.19 - Threonine ammonia-lyase / Threonine dehydratase Description:  threonine dehydratase biosynthetic protein
Genomic Order:  3272 Name:  ? Medtr1g061800
Secondary Identifier:  ? PAC:31093605
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula BRANCHED-CHAIN-AA-SYN-PWY Medicago truncatula pathologic  
Mtruncatula ILEUSYN-PWY Medicago truncatula pathologic  
Mtruncatula PWY-3001 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g061800 0.5kb upstream 0.5kb upstream 5268 true chr1: 26984252-26989519 Medicago truncatula
Medtr1g061800 0.5kb upstream 0.5kb upstream 500 false chr1: 26989020-26989519 Medicago truncatula
Medtr1g061800 0.5kb downstream 0.5kb downstream 5268 true chr1: 26983752-26989019 Medicago truncatula
Medtr1g061800 0.5kb downstream 0.5kb downstream 500 false chr1: 26983752-26984251 Medicago truncatula
Medtr1g061800 1.0kb upstream 1.0kb upstream 5768 true chr1: 26984252-26990019 Medicago truncatula
Medtr1g061800 1.0kb upstream 1.0kb upstream 1000 false chr1: 26989020-26990019 Medicago truncatula
Medtr1g061800 1.0kb downstream 1.0kb downstream 5768 true chr1: 26983252-26989019 Medicago truncatula
Medtr1g061800 1.0kb downstream 1.0kb downstream 1000 false chr1: 26983252-26984251 Medicago truncatula
Medtr1g061800 2.0kb upstream 2.0kb upstream 6768 true chr1: 26984252-26991019 Medicago truncatula
Medtr1g061800 2.0kb upstream 2.0kb upstream 2000 false chr1: 26989020-26991019 Medicago truncatula
Medtr1g061800 2.0kb downstream 2.0kb downstream 6768 true chr1: 26982252-26989019 Medicago truncatula
Medtr1g061800 2.0kb downstream 2.0kb downstream 2000 false chr1: 26982252-26984251 Medicago truncatula
Medtr1g061800 5.0kb upstream 5.0kb upstream 9768 true chr1: 26984252-26994019 Medicago truncatula
Medtr1g061800 5.0kb upstream 5.0kb upstream 5000 false chr1: 26989020-26994019 Medicago truncatula
Medtr1g061800 5.0kb downstream 5.0kb downstream 9768 true chr1: 26979252-26989019 Medicago truncatula
Medtr1g061800 5.0kb downstream 5.0kb downstream 5000 false chr1: 26979252-26984251 Medicago truncatula
Medtr1g061800 10.0kb upstream 10.0kb upstream 14768 true chr1: 26984252-26999019 Medicago truncatula
Medtr1g061800 10.0kb upstream 10.0kb upstream 10000 false chr1: 26989020-26999019 Medicago truncatula
Medtr1g061800 10.0kb downstream 10.0kb downstream 14768 true chr1: 26974252-26989019 Medicago truncatula
Medtr1g061800 10.0kb downstream 10.0kb downstream 10000 false chr1: 26974252-26984251 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040897 5273 Angiosperm View MSA
122301821 5265 Fabidae View MSA
124062087 5270 Rosid View MSA
123737037 5271 Pentapetalae View MSA
122787691 5272 Eudicot View MSA
121344792 5274 Embryophyte View MSA
123427671 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.104        
cufflinks 3.913        
cufflinks 2.686        
cufflinks 3.933        
cufflinks 5.601        
cufflinks 0.767       Low
cufflinks 4.942        
cufflinks 3.437        
cufflinks 14.137     High High

0 Strain