Gene : Medtr1g061220 M. truncatula Mt4.0v1
Defline:  (1 of 1) PF03372//PF15628//PF15629 - Endonuclease/Exonuclease/phosphatase family (Exo_endo_phos) // RRM in Demeter (RRM_DME) // Permuted single zf-CXXC unit (Perm-CXXC) Description:  endonuclease/exonuclease/phosphatase family protein
Genomic Order:  3240 Name:  ? Medtr1g061220
Secondary Identifier:  ? PAC:31095914
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g061220 0.5kb upstream 0.5kb upstream 15381 true chr1: 26739931-26755311 Medicago truncatula
Medtr1g061220 0.5kb upstream 0.5kb upstream 500 false chr1: 26754812-26755311 Medicago truncatula
Medtr1g061220 0.5kb downstream 0.5kb downstream 15381 true chr1: 26739431-26754811 Medicago truncatula
Medtr1g061220 0.5kb downstream 0.5kb downstream 500 false chr1: 26739431-26739930 Medicago truncatula
Medtr1g061220 1.0kb upstream 1.0kb upstream 15881 true chr1: 26739931-26755811 Medicago truncatula
Medtr1g061220 1.0kb upstream 1.0kb upstream 1000 false chr1: 26754812-26755811 Medicago truncatula
Medtr1g061220 1.0kb downstream 1.0kb downstream 15881 true chr1: 26738931-26754811 Medicago truncatula
Medtr1g061220 1.0kb downstream 1.0kb downstream 1000 false chr1: 26738931-26739930 Medicago truncatula
Medtr1g061220 2.0kb upstream 2.0kb upstream 16881 true chr1: 26739931-26756811 Medicago truncatula
Medtr1g061220 2.0kb upstream 2.0kb upstream 2000 false chr1: 26754812-26756811 Medicago truncatula
Medtr1g061220 2.0kb downstream 2.0kb downstream 16881 true chr1: 26737931-26754811 Medicago truncatula
Medtr1g061220 2.0kb downstream 2.0kb downstream 2000 false chr1: 26737931-26739930 Medicago truncatula
Medtr1g061220 5.0kb upstream 5.0kb upstream 19881 true chr1: 26739931-26759811 Medicago truncatula
Medtr1g061220 5.0kb upstream 5.0kb upstream 5000 false chr1: 26754812-26759811 Medicago truncatula
Medtr1g061220 5.0kb downstream 5.0kb downstream 19881 true chr1: 26734931-26754811 Medicago truncatula
Medtr1g061220 5.0kb downstream 5.0kb downstream 5000 false chr1: 26734931-26739930 Medicago truncatula
Medtr1g061220 10.0kb upstream 10.0kb upstream 24881 true chr1: 26739931-26764811 Medicago truncatula
Medtr1g061220 10.0kb upstream 10.0kb upstream 10000 false chr1: 26754812-26764811 Medicago truncatula
Medtr1g061220 10.0kb downstream 10.0kb downstream 24881 true chr1: 26729931-26754811 Medicago truncatula
Medtr1g061220 10.0kb downstream 10.0kb downstream 10000 false chr1: 26729931-26739930 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312789 5265 Fabidae View MSA
124065197 5270 Rosid View MSA
123746757 5271 Pentapetalae View MSA
122794204 5272 Eudicot View MSA
122044419 5273 Angiosperm View MSA
121348532 5274 Embryophyte View MSA
123428690 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.422        
cufflinks 6.839        
cufflinks 6.871        
cufflinks 1.004       Low
cufflinks 7.263        
cufflinks 1.51       Low
cufflinks 3.031        
cufflinks 5.721        
cufflinks 1.774        

0 Strain